Query= MSMg01no492_o22.b1 MSMg01no492_o22.b1 CHROMAT_FILE:
MSMg01no492_o22.b1 PHD_FILE: MSMg01no492_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:17 2005
(310 letters)
>mm_chr7_3208565_3209274
Length = 710
Score = 501 bits (259), Expect = e-146
Identities = 297/311 (95%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 1 cccacatagcaagactctgtctaaaaaagaaaacaaactaaacagaaagactgggaacca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 cccacatagcaagactctgtctaaaaaagaaaataaactaaacagaaagactgggaacca 260
Query: 61 aactgcatagtattagtatgacaagaccctgggctctctccccacactgaaaaggaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactgcatagtattagtatgacaagaccctgggctctctccccacactgaaaaggaagga 320
Query: 121 aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagga 180
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaggaaggaaggaagg---ga-ggaaggaaggaaggaaggaaggaaggaaggaagga 376
Query: 181 aggaaggaaggaaggaaggacaaacagagacccggaatccggagtggttcaaaact-att 239
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 377 aggaaggaaggaaggacggacaaacagcgacccggaatccggagtggttcaaag-tgatt 435
Query: 240 atcacaatatcactttatttgggagacttacgcaagggaatggctttaagcccaagatga 299
||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 436 atcacaatatcacaatatttgggagacttacacaggggaatggctttaagcccaagatga 495
Query: 300 aggggtacaag 310
|||||||||||
Sbjct: 496 aggggtacaag 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_o22.g1 MSMg01no492_o22.g1 CHROMAT_FILE:
MSMg01no492_o22.g1 PHD_FILE: MSMg01no492_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:17 2005
(603 letters)
>mm_chr7_3359598_3360600
Length = 1003
Score = 725 bits (375), Expect = 0.0
Identities = 423/445 (95%), Gaps = 12/445 (2%)
Strand = Plus / Minus
Query: 166 acttgagcaacctagtaaaactgttgtcgaaataacaaaggggaaaacaaaacaaaac-- 223
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1003 acttgagcaacctagtaaaactgttgtcaaaataacaaaggggaaaacaaaacaaaacaa 944
Query: 224 ----aaacaaaacaaaacaattttttatggctaagggtgt-gcttagtggtaggatgctt 278
|||||||||||||||| | |||||||||||| |||||||||||||||||||
Sbjct: 943 aacaaaacaaaacaaaacaa-----gagggctaagggtgtggcttagtggtaggatgctt 889
Query: 279 cctataatcccccagtaaggggcagggaatgtggaagtggaggagacttgtctagcatgt 338
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 888 cctagaatcccccagtaaggggcagggaatgtggaagtggaggagacttgcctagcttgt 829
Query: 339 gtgaggccctaaattcaatcctcggtgttgaatgggggaaaagaaccaacccagcccatg 398
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 828 gtgaggccctaaattcaatcctcagtgttgaatggggggaaagaaccaacccagcccatg 769
Query: 399 tgcatctgcttgtttttgcaaaactaagcctgaggagggaagctgacaaacaagagaggc 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tgcatctgcttgtttttgcaaaactaagcctgaggagggaagctgacaaacaagagaggc 709
Query: 459 tgattgcatcagggcggagggagaacaaggagctgaggagaagtacacacatttgcagga 518
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tgattgcaccagggcggagggagaacaaggagctgaggagaagtacacacatttgcagga 649
Query: 519 ttttcatccctggaattatgttagtattttatacattcaaggaataaacccaaagccagg 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttttcatccctggaattatgttagtattttatacattcaaggaataaacccaaagccagg 589
Query: 579 tgtgatggcggatagcttgctgaat 603
|||||||||||| ||||||||||||
Sbjct: 588 tgtgatggcggaaagcttgctgaat 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
