Query= MSMg01no493_n17.b1 MSMg01no493_n17.b1 CHROMAT_FILE:
MSMg01no493_n17.b1 PHD_FILE: MSMg01no493_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:33 2005
(677 letters)
>mm_chr7_101961916_101962992
Length = 1077
Score = 1286 bits (665), Expect = 0.0
Identities = 671/673 (99%)
Strand = Plus / Plus
Query: 5 gaattcagcatcctttctgacctgctctggctccagtcatgctcatggtacatagaaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcatcctttctgacctgctctggctccagtcatgctcatggtacatagaaaga 264
Query: 65 tgtgcagcctaagcattcatacacactaatactatgataatcttcaaaatcacaagataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgcagcctaagcattcatacacactaatactatgataatcttcaaaatcacaagataa 324
Query: 125 attataggcaatttaattcagtaaagcaagtagaaattgatgcggttgagaatcataaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attataggcaatttaattcagtaaagcaagtagaaattgatgcggttgagaatcataaac 384
Query: 185 atttttcataagtgttcctaatttattttaccaaactaaaattaagcaaaattaaaattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttttcataagtgttcctaatttattttaccaaactaaaattaagcaaaattaaaattt 444
Query: 245 aaaataaaatagtctgataaataagaagaattttgaataaaaacactaacactaaatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaataaaatagtctgataaataagaagaattttgaataaaaacactaacactaaatgat 504
Query: 305 tatttgccaaagtattgcttaaggcattttaaaggaatactttaatccatgatgcaactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatttgccaaagtattgcttaaggcattttaaaggaatactttaatccatgatgcaactt 564
Query: 365 tgaaattcaaatctctgttcatagtgtataaaaaaaaatcaaagtatgtcaattgacata 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 565 tgaaattcatatctctgttcatagtgtataaaaaaaaatcaaagtatgtcaattgtcata 624
Query: 425 aaatactcccaaatataaaaaggactaatttttattttccttgtatattcttcactattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatactcccaaatataaaaaggactaatttttattttccttgtatattcttcactattt 684
Query: 485 tcaactcaatcctgagttaaatagtcgggacttcttctcatggcatttcaaaatgaagaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaactcaatcctgagttaaatagtcgggacttcttctcatggcatttcaaaatgaagaa 744
Query: 545 aataaaagtctaggtgataaatttccatgttatataggcaaatagactggtgatcaagga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aataaaagtctaggtgataaatttccatgttatataggcaaatagactggtgatcaagga 804
Query: 605 aaatgttgcatgtttgtaaaacaaactttacaattttaaaacatgcttaatacaaaaatt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaatgttgcatgtttgtaaaacaaactttacaattttaaaacatgcttaatacaaaaatt 864
Query: 665 ataactagcttaa 677
|||||||||||||
Sbjct: 865 ataactagcttaa 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_n17.g1 MSMg01no493_n17.g1 CHROMAT_FILE:
MSMg01no493_n17.g1 PHD_FILE: MSMg01no493_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:33 2005
(559 letters)
>mm_chr7_102103862_102104819
Length = 958
Score = 872 bits (451), Expect = 0.0
Identities = 472/479 (98%), Gaps = 1/479 (0%)
Strand = Plus / Minus
Query: 81 cagagtgatggtttcaatctaaatatttcagtgagagcaagtgctgatggtatgcctcat 140
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 958 cagagtgatggtttcaatctaaatatttcagtgagaccaagtgctgatggtatgcctcat 899
Query: 141 gtcagagattaaataaagcccattcaaagatggccacaaccaactccctgcaacctgtga 200
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 gtcagagataaaataaagcccattcaaagatggccacaaccaactccctgcaacctgtga 839
Query: 201 ggatgttagcctgtatgacagaaagactttgcatatgaagactgattaagtgttttagga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 ggatgttagcctgtatgacagaaagactttgcatatgaagactgattaagtgttttagga 779
Query: 261 cagaaagaggatgctggatttcttgtggggaactgttgtctaaatatatgttcaagcaaa 320
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 778 cagaaagaggatgctggatttcttgtggggaactgttgtctgaatatatgttcaagcaaa 719
Query: 321 gatgactaagtcagcaaaatgagagagtaagagaaagcgaagaggccacatgatgtgatg 380
||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 718 gatgactaagtcagccaaatgagagagtaagagaaagcaaaaaggccacatgatgtgatg 659
Query: 381 ccatgagcctaagacgtgaacagaaagggaatgccttagagcttcttccctctccttccc 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ccatgagcctaagacgtgaacagaaagggaatgccttagagcttcttccctctccttccc 599
Query: 441 caagccctcagtcacaagaaagtgccaatcatactgaaatctcactttaattctacacat 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 caagccctcagtcacaagaaagtgccaatcatactgaaatctcactttaattctacacat 539
Query: 501 ttttcttttgtgctttttatgcatataagtgtaaaaacagcatatattagcccccttta 559
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttt-cttttgtgctttttatgcatataagtgtaaaaacagcatatattagcccccttta 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space: 520452
Effective search space used: 520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
