Query= MSMg01no497_b24.b1 MSMg01no497_b24.b1 CHROMAT_FILE:
MSMg01no497_b24.b1 PHD_FILE: MSMg01no497_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:42 2005
(554 letters)
>mm_chr7_142373679_142374632
Length = 954
Score = 990 bits (512), Expect = 0.0
Identities = 542/554 (97%), Gaps = 6/554 (1%)
Strand = Plus / Minus
Query: 1 tgcctattatcagactagttgagaacagattgcctgcagccagatggagtaaagtcccct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 551 tgcctattatcagactagttgagaacagattgcctgcaggcagatggagtaaagtcccct 492
Query: 61 ggggggccttgccctcctccagccaaggtggggcagccttattgacctgttagaagaaag 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 491 ggggggccttgccctcctccagccaaggtggggtagccttattgacctgttagaagaaag 432
Query: 121 ctgcttacatgtagccagaactgtccaaacccacacacaatgtgctcatttataagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctgcttacatgtagccagaactgtccaaacccacacacaatgtgctcatttataagcaac 372
Query: 181 ttgtaaaagaactgatattctagtcattggcaggctcggtcctcagggcaattagtagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttgtaaaagaactgatattctagtcattggcaggctcggtcctcagggcaattagtagcc 312
Query: 241 acatgatgtgggcaatgcactgcaggcgaaatctacgatcaattattttcctcggcagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acatgatgtgggcaatgcactgcaggcgaaatctacgatcaattattttcctcggcagtc 252
Query: 301 atagtcct-tgttcactctaacatgcttgtcagaaagcaactgcagcaggtagaggaggt 359
||||| || ||| ||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 251 atagt-ctgtgtgcacactaacatgcttgtcaggaagcaactgcagcaggtagaggaggt 193
Query: 360 gactctgtgggtaaagcgctcgctgtgccaggatgaggtaggtcatgagttccatctccc 419
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 192 gactctgtgggtaaagcgctcgctgtgccaggatg----aggtcatgagttccatctccc 137
Query: 420 agaactcaaggggacaccgaaacgctgagcctggtgcacacacctgtaactccggcactg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 agaactcaaggggacaccgaaacgctgagcctggtgcacacacctgtaactccggcactg 77
Query: 480 gggagatggggtttgtcggccaagccatctaactgaaaccacaagcctgaggttcagtga 539
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gggagatggggtttgttggccaagccatctaactgaaaccacaagcctgaggttcagtga 17
Query: 540 aagctcctgtctca 553
||||||||||||||
Sbjct: 16 aagctcctgtctca 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_b24.g1 MSMg01no497_b24.g1 CHROMAT_FILE:
MSMg01no497_b24.g1 PHD_FILE: MSMg01no497_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:42 2005
(587 letters)
>mm_chr7_142217394_142218380
Length = 987
Score = 1120 bits (579), Expect = 0.0
Identities = 585/587 (99%)
Strand = Plus / Plus
Query: 1 tcccctctctctcatcctgccttggagcccttgggttgcagacatacgttacaaaggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccctctctctcatcctgccttggagcccttgggttgcagacatacgttacaaaggtcc 260
Query: 61 taggggttcaaactcaggttctcatacatacatggtttgtgttttatgttttctccctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggggttcaaactcaggttctcatacatacatggtttgtgttttatgttttctccctag 320
Query: 121 cctttccttttctttactgttattaaacattctttttctgtgtctgagtttatctattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttccttttctttactgttattaaacattctttttctgtgtctgagtttatctattgg 380
Query: 181 atatatatttgagttttgactttctttttcctgttctgtgatatgctaggaaactcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatatttgagttttgactttctttttcctgttctgtgatatgctaggaaactcattc 440
Query: 241 attgtggctgtggaattctctttcggttattttcacactattaatcaaatgctaaacttc 300
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtggttgtggaattctcattcggttattttcacactattaatcaaatgctaaacttc 500
Query: 301 cctgtttggtctctcagtctcttaaataggcttggttcttggttgctctgttctgtaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtttggtctctcagtctcttaaataggcttggttcttggttgctctgttctgtaggt 560
Query: 361 ctgtttttatgagggcgtgtggcttatcatcatgtcttgattgcctgtttgcttggattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtttttatgagggcgtgtggcttatcatcatgtcttgattgcctgtttgcttggattt 620
Query: 421 ttcagaaatagatgattgagatcctatttaaaacaaacaatgaattcattagaaagatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcagaaatagatgattgagatcctatttaaaacaaacaatgaattcattagaaagatgc 680
Query: 481 tgttgccttcctttgtatcaaatttacccttttttctagtttcctgtgatttttatgttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttgccttcctttgtatcaaatttacccttttttctagtttcctgtgatttttatgttg 740
Query: 541 tgtatatctatatgagataaaacagccctttctgtacttctcaaaga 587
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtatatctatatgagataaaacagccctttctgtacttctcaaaga 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
