Query= MSMg01no497_d16.b1 MSMg01no497_d16.b1 CHROMAT_FILE:
MSMg01no497_d16.b1 PHD_FILE: MSMg01no497_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:50 2005
(644 letters)
>mm_chr7_121050411_121051454
Length = 1044
Score = 820 bits (424), Expect = 0.0
Identities = 430/432 (99%)
Strand = Plus / Minus
Query: 1 gattcagtgtgacaccagagttcccaggcttcatctattgctggctattacctccttgtt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 432 gattcagtgtgacaccagagttcccaggcttcaactattgctggctattacctccttgtt 373
Query: 61 agatcaggaacaggaagatcagggacaagactaggttgctaatctcttgtaaaaaatttt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agatcagggacaggaagatcagggacaagactaggttgctaatctcttgtaaaaaatttt 313
Query: 121 ccaggtattgcaatttgctgcttctagaactcagggttggactgagttgacaaaagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ccaggtattgcaatttgctgcttctagaactcagggttggactgagttgacaaaagtttt 253
Query: 181 cattaaaaactaattaaataaacaaacaaacattcccccactaagacttagtctttgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cattaaaaactaattaaataaacaaacaaacattcccccactaagacttagtctttgagg 193
Query: 241 cttcgtgctatggtcccacttcccattcactctctgtttcctgggttggatacaaagtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cttcgtgctatggtcccacttcccattcactctctgtttcctgggttggatacaaagtaa 133
Query: 301 ccagccacctcatacttctgccatcatgccttcaccaccgtaactgactgtgtacctatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ccagccacctcatacttctgccatcatgccttcaccaccgtaactgactgtgtacctatg 73
Query: 361 aactgcaagccaaaagaaactcatccttccttaaattgctccttattaggtgtttggtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aactgcaagccaaaagaaactcatccttccttaaattgctccttattaggtgtttggtta 13
Query: 421 caacaacaggaa 432
||||||||||||
Sbjct: 12 caacaacaggaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_d16.g1 MSMg01no497_d16.g1 CHROMAT_FILE:
MSMg01no497_d16.g1 PHD_FILE: MSMg01no497_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:50 2005
(628 letters)
>mm_chr7_120879003_120880037
Length = 1035
Score = 1094 bits (566), Expect = 0.0
Identities = 614/639 (96%), Gaps = 22/639 (3%)
Strand = Plus / Plus
Query: 1 attccactgtagtgagtatttttctctatttactgtcggccttaaatttggg-tgtgtgg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 attccactgtagtgagtatttttctctatttactgtcggccttaaatttgggttgtgtgg 260
Query: 60 aattttgacatagagtactttttaatttttatggagttgaaagtattgatctttgtgtga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattttgacatagagtactttttaatttttatggagttgaaagtattgatctttgtgtga 320
Query: 120 tttcttctattgattttgagcttt-aaaaaaaatgaaggactagtttttaagaga--ctt 176
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 321 tttcttctattgattttgagctttaaaaaaaaatgaaggactagtttttaagagactctt 380
Query: 177 tatgactgagctgagaaattttgccatctcact----tcactgagaggaggggcaacatg 232
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 tatgactgagctgagaaattttgccatctcactgttctcactgagaggaggggcaacatg 440
Query: 233 aggtggagacaaaggagtatgccgcagcatcccttctcagaaagcca-aggctcttttcc 291
||| ||||||||||||| ||| ||||||||||||||||| | ||||||||||
Sbjct: 441 aggcggagacaaaggag-atg---------cccttctcagaaagccaca-gctcttttcc 489
Query: 292 tgttcttcccagtaaagaatggtatctgggtcaaatgcacaagtaacattttgtgtcttg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgttcttcccagtaaagaatggtatctgggtcaaatgcacaagtaacattttgtgtcttg 549
Query: 352 gcttttatggtttccattggtccgtgaaagcaaccatcttcaggctaagcaattccattt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gcttttatggtttccattggtccgtgaaagcaaccatcttcaggctaagcaattccattt 609
Query: 412 gtctttgggcctctaaggacagtctctgtgttgagagctcttggatgaaagaaaaatagc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtctttgggcctctaaggacagtctctgtgttgagagctcttggatgaaagaaaaatagc 669
Query: 472 aacttcggctgttttactgtttgctgattttattttctcaatatgtaaaatggcaactgg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aacttcggctgttttactgtttgctgattttattttctcaatatgtaaaatggcaactgg 729
Query: 532 ctcagcagacttggctggcctggctcag--tgctctgccctttgggtctttatcgganat 589
|||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 730 ctcagcagacttggctggcctggctcagagtgctctgccctttgggtctttatctgaaat 789
Query: 590 gttagctctccccctgggaccagctccagggtcaaggcc 628
|||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gttagctctccccctgggaccagctccagggtcaaggcc 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1035
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1025
Effective search space: 633450
Effective search space used: 633450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
