Query= MSMg01no498_i20.b1 MSMg01no498_i20.b1 CHROMAT_FILE:
MSMg01no498_i20.b1 PHD_FILE: MSMg01no498_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:38 2005
(385 letters)
>mm_chr7_136765870_136766655
Length = 786
Score = 677 bits (350), Expect = 0.0
Identities = 374/382 (97%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttgtttcca-tgaatccaagtctttaagaaatgactattagtaagcaggccg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttgtttcaaatgaatccaagtctttaagaaatgactattagtaagcaggccg 264
Query: 64 cctccagtggaactggtttatgattagggatgggattgacatctgtatacgctgtgagta 123
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 265 cctccagtggaactggtttatgattagggatgggattgacatctgtgtacgctgtgagaa 324
Query: 124 ttggttttagcttggtattctttctgaagctgacatttttccagtggctgtaatatagta 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttggttttggcttggtattctttctgaagctgacatttttccagtggctgtaatatagta 384
Query: 184 tgtagaaaaaagggttttgtttgtttctatttgattttgagctgaagttttcactctgga 243
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 385 tgtagaaaaaagggttttgtttgtttcaatttgattttgagctgaagctttcactctgga 444
Query: 244 agttggtccccagactgtgaaagtggtatataaagtggtaaaaggagagagagttttaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agttggtccccagactgtgaaagtggtatataaagtggtaaaaggagagagagttttaaa 504
Query: 304 ctgtgtgtatgtgtgatccgaagtggctgccgtcatcctggaaatggaaagagtgagaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtgtgtatgtgtgatccgaagtggctgccgtcatcctggaaatggaaagagtgagaca 564
Query: 364 gtgagtgcctgctgtttgtaca 385
||||||| ||||||||||||||
Sbjct: 565 gtgagtgtctgctgtttgtaca 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_i20.g1 MSMg01no498_i20.g1 CHROMAT_FILE:
MSMg01no498_i20.g1 PHD_FILE: MSMg01no498_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:38 2005
(549 letters)
>mm_chr7_136965825_136966771
Length = 947
Score = 656 bits (339), Expect = 0.0
Identities = 361/369 (97%), Gaps = 2/369 (0%)
Strand = Plus / Minus
Query: 181 gccgccgccgccggggaggttacaagagtagattaggggtgacccctcagtaactgtcaa 240
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 gccgccaccgctggggaggttacaagagtagattaggggtgacccctcagtaactgtcaa 886
Query: 241 agccaattttatttagccagtagttttatatcaaggaacaaagtttgcacatcaaaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 885 agccaattttatttagccagtagttttatatcaaggaacaaagtttgcatatcaaaagct 826
Query: 301 tgtaaactgggggatttactagtaagctgagaccttccagtacagaatcatcaccagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tgtaaactgggggatttactagtaagctgagaccttccagtacagaatcatcaccagaat 766
Query: 361 acagaccaaacctcaacaaggaagtcagagagacgtttaacaaggtctctatgatatttc 420
|||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 765 acagaccaaacctcaacaaggaagtc--agagatgtttaacaaggtctctatgacatttc 708
Query: 421 cacagctgacctaaatgagctttgttggtagaaggagattagagggagagcaaccaacgt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 707 cacagctgacctaaatgagctttgttggtagaaggagattagagggagagcaaccaacat 648
Query: 481 gtgaaatggatccgtggcctggagcacgatgtcctgagacttcatgaatacctttttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gtgaaatggatccgtggcctggagcacgatgtcctgagacttcatgaatacctttttaaa 588
Query: 541 catgacaga 549
|||||||||
Sbjct: 587 catgacaga 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 947
Length adjustment: 10
Effective length of query: 539
Effective length of database: 937
Effective search space: 505043
Effective search space used: 505043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
