NNNNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTAACTTTCTCTGAATGGACTCTAGGTCAGTTCACTGTAC
TTGTTCCTCACCAACAAGTTTCTTTACTACAAAAATACTGTTTCCAAACC
CCAGTGGCCACCCACAGGACTCTGGAAGTTATTCTTATGAACCAACATTC
CCATAAGCACTTTGCAGTTATTTCCAAGGAACTGAGAAGGCCATATGCTT
GGGTCTCAATGTGTTTTGGTTTTCTCCCACAGTGACTTTTCTAGAGCTGA
TAATAGAGTAAGATCTTTAAGTAAATTAATGTCATGATCTTCTGACTCTA
GCAATGCCTTACTTCCACCACTTGCCAGTGCCTACTAGCCCTCAGTCCCA
TACCCTGTGATCTGCCCAGGGACCAGCACATATTATCAAAGAGTAATCAG
ACTTCTTCCCACAGCACCCCATGAGCTTCCCTTCAGTAAAACAAGTGTGA
AAGCTGTCACCATAGGGGACAGATTGGGCTTGCATTCCCTTTGGTCTCGA
CCCATTAACTAGAGTCCATGTCTGAGAGCAAATGAGGCTCTGTTCCAACT
CTGATTTCCTCTTAGTCTGTCCTGTGGCTTCTGGGCTTCCTTTGCCATCT
GGCTGGTGGTTGAAAGCATCAAATATGAGAGCCCCTTGTGTGCCTACTAC
AGCAAGGGGCATGTGATCTAAGAAAATGGACTTAACTCTCACACTCTTCT
GATGAGATTCTTACATCACTTTCATTTTG

CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGAATGGCCACTTCAAAAGGTTTATA
CTCAGTTTCTAGGAATTGGGAAGTTGTCTCTGATAAAACAAAATGTGTGA
GTGACTTAAATGTATGGACCAAAAGGTCAAATAGGACTATTAAGGCCTTA
TGTGGCTGACATAGCCATCAATTTATGGGGATGAGATTTACTACAGCAGT
GATTAACTCAGGTTAATATTTTCTCAATACCAGACAATCCCTAAAATAAG
GGATGAAATGGAAGATGCTTCATGGTAAGAATTGAAAAATGTCATCCAAA
ACAACCACAGACTGCAGATTGCCCCAAAACAAGACACAGCAGGGATTGAG
TGAGTTTCCATATTTATAAGGGTGGGACCACTACTGAAATTATACCAACA
TCCTTACCCTTAAAAATGTTTGATTAACAAAGCTGTGTGAGTAGAGCAAA
TTCCCTTAACTAAAGAAAAAATACAGGAACTTGAACAGTTGATACAAGAG
CATTTGGAGGTTCAACACATAGAAGAGCCTATCAGCCCATGGAATTCTCC
TGTATTTATTATAAAAAAAGAAATCAGTGAAATAGAGAATATTAACAGAT
TTGCGAGCAGTGAGTAGAGTAATTCAACCAAATGGCCTGATATAGCCTGG
AATTCCTTTACCTTTATTACCTATGGCATGGCCTATGGTACTAATTGTTT
N

Query= MSMg01no498_o10.b1 MSMg01no498_o10.b1 CHROMAT_FILE:
MSMg01no498_o10.b1 PHD_FILE: MSMg01no498_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:08 2005
         (565 letters)



>mm_chr7_89720982_89721945
          Length = 964

 Score =  953 bits (493), Expect = 0.0
 Identities = 544/561 (96%), Gaps = 1/561 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttaactttctctgaatggactctaggtcagttcactgtacttgttcctcaccaa 64
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaactggctctgaatggactctaggtcagttcactgtacttgttcctcaccaa 264

                                                                       
Query: 65  caagtttctttactacaaaaatactgtttccaaaccccagtggccacccacaggactctg 124
           |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 265 caagcttctttactacaaaaatactgtttccaaa-cccaatggccacccacaggactctg 323

                                                                       
Query: 125 gaagttattcttatgaaccaacattcccataagcactttgcagttatttccaaggaactg 184
           |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 324 gaagttgttcttatgaaccaacattcccatacgcactttgcagttatttccaaggatctg 383

                                                                       
Query: 185 agaaggccatatgcttgggtctcaatgtgttttggttttctcccacagtgacttttctag 244
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 384 agaaggccatatgtttgggtctcaatgtgttttggttttctcccacagtgacttttccag 443

                                                                       
Query: 245 agctgataatagagtaagatctttaagtaaattaatgtcatgatcttctgactctagcaa 304
            |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 ggctggtaatagagtaagatctttaagtaaatcaatgtcatgatcttctgactctagcaa 503

                                                                       
Query: 305 tgccttacttccaccacttgccagtgcctactagccctcagtcccataccctgtgatctg 364
           ||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 504 tgcctcacttccatcacttgccagtgcctactagccttcagtcccacaccctgtgatctg 563

                                                                       
Query: 365 cccagggaccagcacatattatcaaagagtaatcagacttcttcccacagcaccccatga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccagggaccagcacatattatcaaagagtaatcagacttcttcccacagcaccccatga 623

                                                                       
Query: 425 gcttcccttcagtaaaacaagtgtgaaagctgtcaccataggggacagattgggcttgca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcttcccttcagtaaaacaagtgtgaaagctgtcaccataggggacagattgggcttgca 683

                                                                       
Query: 485 ttccctttggtctcgacccattaactagagtccatgtctgagagcaaatgaggctctgtt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttccctttggtctcgacccattaactagagtccatgtctgagagcaaatgaggctctgtt 743

                                
Query: 545 ccaactctgatttcctcttag 565
           |||||||||||||||||||||
Sbjct: 744 ccaactctgatttcctcttag 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space:   529470
Effective search space used:   529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)