Query= MSMg01no507_m08.b1 MSMg01no507_m08.b1 CHROMAT_FILE:
MSMg01no507_m08.b1 PHD_FILE: MSMg01no507_m08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:25 2005
(659 letters)
>mm_chr7_57223169_57224227
Length = 1059
Score = 1220 bits (631), Expect = 0.0
Identities = 652/659 (98%)
Strand = Plus / Minus
Query: 1 aaatttatttgctctgtgaagccttcagggacccaggtcctttcagacctttttggcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 aaatttatttgctctgtgaagccttcagggacccaggtcctttcagacctttttggcatc 968
Query: 61 atctctaagatacagttgttatccttgctcttctagttggctgccagcactccagccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 atctctaagatacagttgttatccttgctcttctagttggctgccagcactccagccatt 908
Query: 121 gcacctgcattccagatagcaaaccatgggaggcaaagagagcatgcctgcctgggagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gcacctgcattccagatagcaaaccatgggaggcaaagagagcatgcctgcctgggagcc 848
Query: 181 tcatgtgtcagttccacttgccttctgacagaatctattctcatggctactccgtacaca 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 tcacgtgtcagttccacttgccttctgacagaatctattctcatggctactccgtacaca 788
Query: 241 tctgctgccttctgttgtggaatggccacaaaacgcacttctggcagctttggctttata 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 787 tctgctgcctactgttgtggaatggccacaaaacgcacttctggcagctttggccttgta 728
Query: 301 atattcagataaaataatattgttcaactattcatactgttagcaacactaagcactggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atattcagataaaataatattgttcaactattcatactgttagcaacactaagcactggg 668
Query: 361 tcttgtgtagctgtagcttggctagggttcagttccaccagactgattattgaccattcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tcttgtgtagctgtagcttggctagggttcagttccaccagactgattattgaccattcc 608
Query: 421 aatgcacactgcaggagatgggctggcctcctctcagtacaggtctgtgatggcatccca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 607 aatgcacactgcaggagatgggctggcctcctctcagtacaggtctgtgatgtcatccca 548
Query: 481 gttgccacgtgatgaccatggtatagccaggacacgttcttctcaaagcccaaagtggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gttgccacgtgatgaccatggtatagccaggacacgttcttctcaaagcccaaagtggca 488
Query: 541 ccaaaaagaaaacaaagaggacctttccgatgtagacacaggtctggcacactgcccaca 600
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 487 ccaaaaagaaaataaagaggacctttccgatgtagacacaggcctggcacactgcccaca 428
Query: 601 ggacacggagaaaggcgtgggtgcaaagctgaggtcaggggccaagacacataacccac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggacacggagaaaggcgtgggtgcaaagctgaggtcaggggccaagacacataacccac 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_m08.g1 MSMg01no507_m08.g1 CHROMAT_FILE:
MSMg01no507_m08.g1 PHD_FILE: MSMg01no507_m08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:26 2005
(636 letters)
>mm_chr7_57133749_57134783
Length = 1035
Score = 1123 bits (581), Expect = 0.0
Identities = 623/637 (97%), Gaps = 3/637 (0%)
Strand = Plus / Plus
Query: 1 aaggagcagagggatgaaaattgtagaagcatcgcttcagccaagcgtggagatcgttaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aaggagcagagggatgaaaattgtagaagcatcgcttcagccaagtgtggagatcgttaa 260
Query: 61 gctgcagggggctcttaatatcttcagtatttcacagcagccctcagtttcccaataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgcagggggctcttaatatcttcagtatttcacagcagccctcagtttcccaataaag 320
Query: 121 agagcaccagcgcccaccctttagaaggtaaatgaaatcactcgctcaccaccgagttct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 321 agagcaccagcgcccaccctttagaaggtaaatgaaatcactcgctcaccactgagc-ct 379
Query: 181 aagcatcttcccattcgccttcaattacccccatctccagttacatcactgctagtgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagcatcttcccattcgccttcaattacccccatctccagttacatcactgctagtgaga 439
Query: 241 tgattatctaattc-gcagacatgtcagtggcagtgaattaaattcgaataaagggagct 299
|||||| | || | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgattaacaaaa-cagcagacatgtcagtggcagtgaattaaattcgaataaagggagct 498
Query: 300 cagtttgtgttcaatttcccacttggggacgacgcctaaccgcgccctttagcttcctac 359
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 499 cagtttgtgttcaatttcccacttggggacgacgcctaaccgcgttctttagcttcctac 558
Query: 360 tgggattcccacatggaagtaaatgtgcctggccaaagcctggacatgtatgtggcaagc 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 559 tgggattcccacatggaagtaaatgtgcctggccaaaacctggacatgtatgtggcaagc 618
Query: 420 actgcagtccaaggatggggtcacttccccatcccaggctgagttaccaaggctggtgtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actgcagtccaaggatggggtcacttccccatcccaggctgagttaccaaggctggtgtc 678
Query: 480 attgaaagacggatgtccctcatcaggcgttctgacgaatcatgtaaatagaggcagaca 539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 679 attgaaagacggatgtccctcatcaggcgttctgaggaatcatgtaaatagaggcagaca 738
Query: 540 ccttccaggactgacttctgccacattgatgacgtcctctctcgtagccaaaccaagtgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccttccaggactgacttctgccacattgatgacgtcctctctcgtagccaaaccaagtgg 798
Query: 600 aaaattggatttggagaacggggcttccatcactacc 636
|||||||||||||||||| ||||||||||||||||||
Sbjct: 799 aaaattggatttggagaatggggcttccatcactacc 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
