Query= MSMg01no507_n14.b1 MSMg01no507_n14.b1 CHROMAT_FILE:
MSMg01no507_n14.b1 PHD_FILE: MSMg01no507_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:32 2005
(237 letters)
>mm_chr7_85597261_85597902
Length = 642
Score = 400 bits (207), Expect = e-116
Identities = 229/239 (95%), Gaps = 5/239 (2%)
Strand = Plus / Plus
Query: 1 ttaatgaccaagaacaagttaaggaatccgagatggcatttacacattgccaagtgacca 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatgaccaagaacaagttaaaaaatccgagatggcatttacacattgccaagtgacca 260
Query: 61 gagtgttcctacatagggttgttctactgtccctggcctaaaattgacagaaatggcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtgttcctacatagggttgttctactgtccctggcctaaaattgacagaaatggcagt 320
Query: 121 gattgctgctgaccccatcatggaagagtaatttaaaaaaa-----gccctaattgtcag 175
|||||||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 321 tattgctgctgaccccatcatggaagagtaatttaaaaaaaaaaaagccctaaatgccag 380
Query: 176 ttccttctaggattgtccagccctaccctcaactctgttataaactgagcttcagtgaa 234
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccttctaggattgtccagccctaccctcaactctgttataaactgagcttcagtgaa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 642
Length adjustment: 9
Effective length of query: 228
Effective length of database: 633
Effective search space: 144324
Effective search space used: 144324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no507_n14.g1 MSMg01no507_n14.g1 CHROMAT_FILE:
MSMg01no507_n14.g1 PHD_FILE: MSMg01no507_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:32 2005
(249 letters)
>mm_chr7_85786211_85786859
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 ttttatatctctttttgtgcatgctagttttcagtccttgtccctaattcagacagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttttatatctctttttgtgcatgctagttttcagtccttgtccctaattcagacagcctg 390
Query: 61 gcattcagtgtcggttaggcatgtgcactgcagtgctgtgcttcttacctgcatggaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcattcagtgtcggttaggcatgtgcactgcagtgctgtgcttcttacctgcatggaagc 330
Query: 121 tctcgatgcccctaaataaatagagcagcacatgaattactattggggaagcacaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctcgatgcccctaaataaatagagcagcacatgaattactattggggaagcacaaatta 270
Query: 181 aaggcatatggcaatccaggtgcctgtcctagctcttgcccattctggccttctctgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaggcatatggcaatccaggtgcctgtcctagctcttgcccattctggccttctctgaca 210
Query: 241 tgtctctct 249
|||||||||
Sbjct: 209 tgtctctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
