Query= MSMg01no512_h19.b1 MSMg01no512_h19.b1 CHROMAT_FILE:
MSMg01no512_h19.b1 PHD_FILE: MSMg01no512_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:39 2005
(652 letters)
>mm_chr7_85596406_85597457
Length = 1052
Score = 1212 bits (627), Expect = 0.0
Identities = 644/651 (98%), Gaps = 4/651 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactattgagagggaaatggaaggagggcccggaacggagaaggaaagacgtgc 63
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 852 ggaattcactagtgagagggaaatggaaggagggcccggaacggagaaggaaagacgtac 793
Query: 64 cctagtcaaggggtaaggatgtcagtgacagcagctgcccctgttaaaatcttcctaatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cctagtcaaggggtaaggatgtcagtgacagcagctgcccctgttaaaatcttcctaatc 733
Query: 124 ctcacactggccaggattccaagccattcacaccactcctgctctgtatttttatgctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ctcacactggccaggattccaagccattcacaccactcctgctctgtatttttatgctgc 673
Query: 184 agtgtgctctctgggttggaggtaggaggagggtggggcagagtctgacttcctttgggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agtgtgctctctgggttggaggtaggaggagggtggggcagagtctgacttcctttgggg 613
Query: 244 ttcttttcatagttctgtagcatgcatgaggcagatagctacactggaactcagtcctta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttcttttcatagttctgtagcatgcatgaggcagatagctacactggaactcagtcctta 553
Query: 304 gtggtgtgtctgctcatctaggagggtgaatctagagacctgcttcccaaggtctgggca 363
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtg--gtgtctgctcatctaggagggtgaatctagagacctgcttcccaaggtctgggca 495
Query: 364 ggtacttatttagggccagtcagctaattgtcttcttctcctttgtatttcttttcagag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggtacttatttagggccagtcagctaattgtcttcttctcctttgtatttcttttcagag 435
Query: 424 tctgatgcgagccctacacctcctatcactgtgacccacaaaccagaggaagacactttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctgatgcgagccctacacctcctatcactgtgacccacaaaccagaggaagacactttt 375
Query: 484 ggggtgagttacttcctgggttaagaggaacacacttaagggtggagccattatttggac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggggtgagttacttcctgggttaagaggaacacacttaagggtggagccattatttggac 315
Query: 544 ttcatttgaggtgctaacttgtctacatagtctctcacttgaaaccagcagtag--aaaa 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 ttcatttgaggtgctaacttgtctacatagtctctcacttgaaaccagcagtagaaaaaa 255
Query: 602 aaaaaaccagtgaaaattgatttcctttgaggtggtttaaactgtccttgt 652
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaaaaaacagtgaaaattgatttcctttgaggtggtttaaactgtccttgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_h19.g1 MSMg01no512_h19.g1 CHROMAT_FILE:
MSMg01no512_h19.g1 PHD_FILE: MSMg01no512_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:39 2005
(559 letters)
>mm_chr7_85426083_85427041
Length = 959
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%)
Strand = Plus / Plus
Query: 1 tgtgactgagagtcatttctcctctcttataggctgctccatttggcctgctcccaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgactgagagtcatttctcctctcttataggctgctccatttggcctgctcccaaatg 260
Query: 61 ctcactcacctttgcacctggtaaaagaagcaagcccagattcaaagatcccagctccgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcactcacctttgcacctggtaaaagaagcaagcccagattcaaagatcccagctccgc 320
Query: 121 caagaacaaatctgcaccatgcgcccacctgaaccaggaaaccactttcaacagtaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagaacaaatctgcaccatgcgcccacctgaaccaggaaaccactttcaacagtaagta 380
Query: 181 attctgattgccccggggctctgttgcctaatggagccctttgtttgattgtgtgttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attctgattgccccggggctctgttgcctaatggagccctttgtttgattgtgtgttatc 440
Query: 241 aactacacattgcagagggccaggatttctgggggtgagggaggctcaaggaggccagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactacacattgcagagggccaggatttctgggggtgagggaggctcaaggaggccagag 500
Query: 301 agcagcaagaaaaaagatgacaaaaattccagcatgtggaaggcacactgggtgtccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagcaagaaaaaagatgacaaaaattccagcatgtggaaggcacactgggtgtccttg 560
Query: 361 gtgaacgcctttacatagtcatattgagagaaatggccaaatggcatgatgggagatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaacgcctttacatagtcatattgagagaaatggccaaatggcatgatgggagatgag 620
Query: 421 aggctcccttttgaagactcggctaagaaaggtagatggagtgctggaagaggtgcctag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggctcccttttgaagactcggctaagaaaggtagatggagtgctggaagaggtgcctag 680
Query: 481 aagggagacttcttctaagcttgcctgagaggcatggctgatggcttcagccaagttccc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 aagggagacttcttctaagcttgcctgagaggcatggctgatggcttcagccaagtcccc 740
Query: 541 atcgcagtcaaactagac 558
||||||||||||||||||
Sbjct: 741 atcgcagtcaaactagac 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
