Query= MSMg01no512_p18.b1 MSMg01no512_p18.b1 CHROMAT_FILE:
MSMg01no512_p18.b1 PHD_FILE: MSMg01no512_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:20 2005
(634 letters)
>mm_chr7_53804954_53805987
Length = 1034
Score = 1149 bits (594), Expect = 0.0
Identities = 624/634 (98%)
Strand = Plus / Plus
Query: 1 agtattagtagacgctggaaagatggctgaacgtgtgaacaaaggaagggataaatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtattagtagacgctggaaagatggctgaacgtgtgaacaaaggaagggataaatgagt 260
Query: 61 ctacagcctagcagctggggggatgagggagggagaaacgcctcacattgcatcatggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacagcctagcagctggggggatgagggagggagaaacgcctcacattgcatcatggcg 320
Query: 121 ggagaggaaggaagcagcgggtgagaggaaggatgatgatggagaggcaggtgtaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ggagaggaaggaagcagcgggtgagaggaaggatgatgatggagaggcaggtgtaacgct 380
Query: 181 gaggaggctggtgtaactgagcaggtgagaagccaccaagtaggttaaagacaatgggaa 240
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggaagctggtgtgactgagcaggtgagaagccaccaagtaggttaaagacaatgggaa 440
Query: 241 caagaggaaagggagggggagagagatgacaagggagtcattgactgggggaccaggaga 300
| ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 cgagagggaaggaagggggagagagatgacaagggagtgattgactgggggaccaggaga 500
Query: 301 aaggggacatcaaagtctcacagaagcctggaggcctgtgcctaggagtgtgacatcagg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 aaggggacatcaaagtctcacagaagcctggaggcctgtgcctaggactgtgacatcagg 560
Query: 361 aaatgagaggtcggacagagaacaaggtgcttcacagatatcggttcaccgcatccttgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 aaatgagaggtcggacagagaacaaggtgcttcacagatatcggttcaccgcatccttat 620
Query: 421 gaacttgagattgtggtagtgttgggtcccgaccacatttctcttggcccttccactact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaacttgagattgtggtagtgttgggtcccgaccacatttctcttggcccttccactact 680
Query: 481 ctgacctgtgattgctggaatcttgctggcttctcactgctctttcacatgtcagaccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgacctgtgattgctggaatcttgctggcttctcactgctctttcacatgtcagaccac 740
Query: 541 tctgctttgggggctctacccagatattgtccattgccgggacaactaggtcccttgcag 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctactttgggggctctacccagatattgtccattgccgggacaactaggtcccttgcag 800
Query: 601 ctccttgctgtcagcagctcagtgaaccccatta 634
||||||||||||||||||||||||||||||||||
Sbjct: 801 ctccttgctgtcagcagctcagtgaaccccatta 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_p18.g1 MSMg01no512_p18.g1 CHROMAT_FILE:
MSMg01no512_p18.g1 PHD_FILE: MSMg01no512_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:20 2005
(642 letters)
>mm_chr7_53947724_53948764
Length = 1041
Score = 808 bits (418), Expect = 0.0
Identities = 448/458 (97%), Gaps = 3/458 (0%)
Strand = Plus / Minus
Query: 1 ctttctaatatttttcaggtgttaacaaaggtaggaggaagtattagtgacttcttcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctttctaatatttttcaggtgttaacaaaggtaggaggaagtattagtgacttcttcagc 396
Query: 61 aaaataaaaggtgtagattacttgacgtcctgaacttgaaacttttagggaaggagtggc 120
||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||
Sbjct: 395 aaaataaaaggtgcagattacctgatgtcctgaacttgaaac-tttagggaaggagtggc 337
Query: 121 tgtccaggggtagaagtgacaagagggtaccctgggagagatgaccgggcaaacacaggg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtccaggggtagaagtgacaagcgggtaccctgggagagatgaccgggcaaacacaggg 277
Query: 181 ctccttgttgcagcctcggctccactgttatttcttatggtattaaaacaatttctttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctccttgttgcagcctcggctccactgttatttcttatggtattaaaacaatttctttcc 217
Query: 241 tcctcccttctcctctcctgtcttgtgtgactttggagttgggacctgggaccttgtgct 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 216 tcctcccttctcctctcctgtcttgtgtgacttgggagttgggacctgggaccttgtgct 157
Query: 301 tgataggcaagcggtctccctctgagctgtaacctcagccctgatcttagttttttgttt 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 156 tgataggcaagaggtctccctctgagctgtaacctcagccctgatcttagttttttg-tt 98
Query: 361 taagtggggcaggttacacatgcgtggatgtcacaggacaacttgcaagagtatgttctt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 97 taagtggggcaggttacacatgcgtggacgtcacaggacaacttgcaagagtatgttctt 38
Query: 421 tctctccaccattactttttatatataaaaaagtatga 458
|||||||||||||||||||||||||| |||||||||||
Sbjct: 37 tctctccaccattactttttatatat-aaaaagtatga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
