Query= MSMg01no515_c17.b1 MSMg01no515_c17.b1 CHROMAT_FILE:
MSMg01no515_c17.b1 PHD_FILE: MSMg01no515_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:22 2005
(704 letters)
>mm_chr7_99172260_99173363
Length = 1104
Score = 737 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Minus
Query: 324 ataaaggtttaggggctggggagatggctcaggggttaagagagctgtctactctttcaa 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ataaaggtttaggggctggggagatggctcaggggttaagagagctgtctactctttcaa 1045
Query: 384 gaggtcctgtgttcaaatcccagcaaccacatggtggctcacagccatctgaaatgggta 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 gaggtcctgtgttcaaatcccagcaaccacatggtggctcacagccatctgaaatgggta 985
Query: 444 ctgatgccctcttctggtgtgtctgaagacagcgactgtgtactcatatacataaaacga 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ctgatgccctcttctggtgtgtctgaagacagcgactgtgtactcatatacataaaacga 925
Query: 504 ataagtaaatcttaaaaaaagtctgtactaaaacatgggattttaggttgagtgacaata 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ataagtaaatcttaaaaaaagtctgtactaaaacatgggattttaggttgagtgacaata 865
Query: 564 ttaaatgacctctataagcattttatatgtagacagatatatgaacatacgtatagatac 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttaaatgacctctataagcattttatatgtagacagatatatgaacatacgtatagatac 805
Query: 624 tgaatatttaaatataaaaatgtctcctttaaattctaaatttctgtagctctaagaagt 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgaatatttaaatataaaaatgtctcctttaaattctaaatttctgtagctctaagaagt 745
Query: 684 ctataaatgattgatttcctc 704
|||||||||||||||||||||
Sbjct: 744 ctataaatgattgatttcctc 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no515_c17.g1 MSMg01no515_c17.g1 CHROMAT_FILE:
MSMg01no515_c17.g1 PHD_FILE: MSMg01no515_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:22 2005
(621 letters)
>mm_chr7_99017887_99018912
Length = 1026
Score = 1125 bits (582), Expect = 0.0
Identities = 613/626 (97%), Gaps = 5/626 (0%)
Strand = Plus / Plus
Query: 1 tgcatatgccaatgtgcctgaaactaaatttctaacgtttccatcataagaaaatattaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tgcatatgccaatgtgcctgaaactaaatttctaatgtttccatcataagaaaatattaa 260
Query: 61 atatctgaaggagtaggtatgcaaacagactaatctttatggatgacatttaaaatcata 120
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 atatctgaaggggtaggtatgcaaacagactaatcgttatggatgacatttaaaatcata 320
Query: 121 ttacaaccatgtgtgctatagctgtaattatcaatataagcttgaaaaatattagctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaaccatgtgtgctatagctgtaattatcaatataagcttgaaaaatattagctgat 380
Query: 181 atcaatgctatctgaacaatatcattgaaactgtgaacagttggatcatgaccagacaca 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atcaatgctatctgaacaatatcattgaaattgtgaacagttggatcatgaccagacaca 440
Query: 241 agacagactactgtcagcttttgttttgtcccttgagttccagaaagacacaaatcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacagactactgtcagcttttgttttgtcccttgagttccagaaagacacaaatcatct 500
Query: 301 ccttttcatatctttcagtgccttcaagagtcctggtgtagacacttggtatcatgaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttttcatatctttcagtgccttcaagagtcctggtgtagacacttggtatcatgaatg 560
Query: 361 ttctgtgatccaaagggattcacatgcactctgctatcctgactgtcatgactaagatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgtgatccaaagggattcacatgcactctgctatcctgactgtcatgactaagatag 620
Query: 421 agccacacatgctgtcacctgggccattcccccttgccactgttcttcctccgtagtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 621 agccacacatgctgtcacctgggccattcccccttgccactgttcttcctctatagcgct 680
Query: 481 agagcactgggacagggtttacttctctttctgtctactctac-----atgcctcctaaa 535
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 681 agagcactgggacagggtttacttctctttctggctactctactttacatgcctcctaaa 740
Query: 536 ttaacatagtccctgcaggactcagcctagtgaaaggcatggaacagggaacttatagac 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaacatagtccctgcaggactcagcctagtgaaaggcatggaacagggaacttatagac 800
Query: 596 agcaaataaaatgatgattatgtgga 621
||||||||||||||||||||||||||
Sbjct: 801 agcaaataaaatgatgattatgtgga 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1026
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1016
Effective search space: 620776
Effective search space used: 620776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
