Query= MSMg01no516_g07.b1 MSMg01no516_g07.b1 CHROMAT_FILE:
MSMg01no516_g07.b1 PHD_FILE: MSMg01no516_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:06 2005
(579 letters)
>mm_chr7_70767162_70768140
Length = 979
Score = 1083 bits (560), Expect = 0.0
Identities = 572/576 (99%), Gaps = 2/576 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttgct-ttccttgcaagtttgtgaggaaatggaacttcagagtgctttgcta 63
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttgctatt-ctagcaagtttgtgaggaaatggaacttcagagtgctttgcta 263
Query: 64 ggctcgtaagtttattagtttaaggatatatttgcaaatcaatgctcgacactaacatca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggctcgtaagtttattagtttaaggatatatttgcaaatcaatgctcgacactaacatca 323
Query: 124 gctgcaacaggccgaccttttcttggtgttcctcagtactaaccctgtgcttgaggagcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctgcaacaggccgaccttttcttggtgttcctcagtactaaccctgtgcttgaggagcc 383
Query: 184 acactactgcagatggagccacactactgcagatggagcaatccacatcaaataggaagc 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 acactactgcagatggagccacactactgcagatggagctatccacatcaaataggaagc 443
Query: 244 agttgggcccaggagcatggatcaaagataaagcaattgcctagctcaagggagtctctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agttgggcccaggagcatggatcaaagataaagcaattgcctagctcaagggagtctctg 503
Query: 304 ggttcagtccccaacaaggcagaaaatactttttaaagaaagcagtgaagacccaagatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggttcagtccccaacaaggcagaaaatactttttaaagaaagcagtgaagacccaagatt 563
Query: 364 agacatcagtgttcctagctcctttgaaatgcctgtatgaatatagtatatttctagtgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agacatcagtgttcctagctcctttgaaatgcctgtatgaatatagtatatttctagtgt 623
Query: 424 ctaaaaaaaatacgaataactaaataaaaaaatagtatagattgttcattagtctatgaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctaaaaaaaatacgaataactaaataaaaaaatagtatagattgttcattagtctatgaa 683
Query: 484 attcccaaaagaaccatagaagccagaattgttaagacagtctcaagtcatcgggatggt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 attcccaaaagaaccatagaagccagaattgttaagacagtctcaagtcatcgggatggt 743
Query: 544 ggctatgcatgcctgtgactttttttcccccttttt 579
||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggctatgcatgcctgtgactttttttcccccttttt 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_g07.g1 MSMg01no516_g07.g1 CHROMAT_FILE:
MSMg01no516_g07.g1 PHD_FILE: MSMg01no516_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:06 2005
(644 letters)
>mm_chr7_70933153_70934201
Length = 1049
Score = 951 bits (492), Expect = 0.0
Identities = 623/706 (88%), Gaps = 62/706 (8%)
Strand = Plus / Minus
Query: 1 ccagagcggcttcaggggcgagcggacgcattagaaatggtaacggggagaggagagggg 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 958 ccagagcggcttcaggggcgagcggacacattagaaatggtaacggggagaggagaggga 899
Query: 61 acagatcccaggaccacagatccctgctcttctctggagttagagattttcatcgagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 acagatcccaggaccacagatccctgctcttctctggagttagagattttcatcgagtga 839
Query: 121 atgctttctgttttgtagagtgttttaggacgattagtgggtgtgttaagtggttgtttc 180
||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||
Sbjct: 838 atgctttctgttttgtagagtattttaggatgattactgggcgtgttaagtggttgtttc 779
Query: 181 ccacc------------------------------------------------------- 185
|||||
Sbjct: 778 ccaccagttttattgttactaatggtgtgtctcttgggtgtctctcaaaagcccacgtgt 719
Query: 186 --aagtcttggccctccaattgtgctgctg-tggaacattgagttgctttaggaggtgag 242
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 718 taaagtcttggccctccaattgtggtgctgttggaagattgagttgctttaggaggtgag 659
Query: 243 gcctaaggacaggttcttaggacatttttgggtgcccttcttcttttcttttgccacccc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gcctaaggacaggttcttaggacatttttgggtgcccttcttcttttcttttgccacccc 599
Query: 303 tggcttgtgatatgagtggctttactctaccacaagttcatagaatgctgtgttgtagtc 362
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 598 tggcttgtgatatgagtggctttgctctaccacaagctcatagaatgctgtgttgtagtc 539
Query: 363 caagctaatgggaccagtctgccctgaagcagtcagctgtccaaagaac----tcctcat 418
|||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 538 caagctaatgcgaccagtctgccctgaagcagtcagatgtccaaagaactccttcctcat 479
Query: 419 tgtgggtcatgccagacatctttctcttgtatcctgctgtacattcttatttttaactaa 478
||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||
Sbjct: 478 tgtgggtcatgccagacatctttctcttgtatcctactgtacattcttatttttgattaa 419
Query: 479 cttaaattaatttgtaaaaaatttgtaaaaatattttattttttaatagatattttctat 538
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 418 cttaaattaatttgtaaaaaatttgtaaaaatattttattttttattagatatttcctat 359
Query: 539 atttacatttcaaattttatcccttttcctgatttctcctctgaaccctccctcccatcc 598
|||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 358 atttacatttcaaattttatcccttttcctgatttcccctccgaaccccccctcccatcc 299
Query: 599 catcccctctcccactgttcactaggccacccactcctgcttccct 644
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 298 catcccctctcccactgttcactaagccacccactcctgcttccct 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1049
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1039
Effective search space: 658726
Effective search space used: 658726
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
