Query= MSMg01no517_b14.b1 MSMg01no517_b14.b1 CHROMAT_FILE:
MSMg01no517_b14.b1 PHD_FILE: MSMg01no517_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:04 2005
(599 letters)
>mm_chr7_75408687_75409689
Length = 1003
Score = 1118 bits (578), Expect = 0.0
Identities = 593/600 (98%), Gaps = 4/600 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaccaacaccagttgccacccgtgttcccctgggagagctgtttacaagcag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctaccaacaccagttgccacccgtgttcccctgggagagctgtttacaagcag 263
Query: 64 agtcgagcaagtgcgcattccaggccccagcagaaagcagccgaaaccaaaacccggaac 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 agtcgagcaagtgcgcattccaggccccagcagaaagcagccaaaaccaaaacccggaac 323
Query: 124 gcagggaaacttgggcttaccggtcaccaccacgcagcgggactgcgaatccatgagacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagggaaacttgggcttaccggtcaccaccacgcagcgggactgcgaatccatgagacc 383
Query: 184 cggctgcgctaggctggtccagccgagatccaggatggaaaagaccacgtggggagtgtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cggctgcgctaggctggtccagccgagatccaggatggaaaagaccacgtggggagtgtg 443
Query: 244 gaaaggccacgcccctcgggagcagaactggcggcctttggacactcgggggtcatagcg 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 gaaaggccacgcccctcgggagcagaactggcggcctttggacactcgagggtcatagcg 503
Query: 304 ccgccagaactaatatggactcagcttagttggttccgtaggatacatgacatcatggtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccgccagaactaatatggactcagcttagttggttccgtaggatacatgacatcatggtg 563
Query: 364 ctcgaccctatagcaaccaactgtcccaagactgtggggttactaggacccaccactgaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcgaccctatagcaaccaactgtcccaagactgtggggttactaggacccaccactgaa 623
Query: 424 atcgctcaagctaggaccgcgcgggtcaccctctctgttttttgcacctatcttcttgat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcgctcaagctaggaccgcgcgggtcaccctctctgttttttgcacctatcttcttgat 683
Query: 484 taccttgatttttttttcctttttccttttttttttt----ctcggtagaaccccctgct 539
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 684 taccttgatttttttttcctttttcctttttttttttttttctcggtagaaccccctgct 743
Query: 540 gcccggagtattgccctgtgtttggaaagtgtgacttggcttatgattgttcttgaattc 599
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcctggagtattgccctgtgtttggaaagtgtgacttggcttatgattgttcttgaattc 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1003
Length adjustment: 10
Effective length of query: 589
Effective length of database: 993
Effective search space: 584877
Effective search space used: 584877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_b14.g1 MSMg01no517_b14.g1 CHROMAT_FILE:
MSMg01no517_b14.g1 PHD_FILE: MSMg01no517_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:04 2005
(292 letters)
>mm_chr7_75599355_75600045
Length = 691
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 aaccaatgagtgagctaaaaatgcaaaataatgcagtcgctcatttgataggacggatcc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 487 aaccaatgagtgagctaaaaatgcaaaataatgcagtcgctcatttggtaggacggatcc 428
Query: 61 actcttacattgctcagtggttgtttgttgagtgcatgctctgccagtaagtataaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 actcttacattgctcagtggttgtttgttgagtgcatgctctgccagtaagtataaaagg 368
Query: 121 cattcagaaaacaagaatcagagctaaagagagttagcaagagaggtggagatggtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cattcagaaaacaagaatcagagctaaagagagttagcaagagaggtggagatggtctgg 308
Query: 181 gaggagatgaggaaagggaaaggatatgaccacaataccacagccacagtgccaagatcc 240
|||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 307 gaggagatgaggaaggggaaaggatatgaccacagtaccacagctacagtgccaagatcc 248
Query: 241 tgggtcccaacctcatacatgttttggtgngtggtggtggtggtggtg 288
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 247 tgggtcccaacctcatacatgttttggtg-gtggtggtggtggtggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
