Query= MSMg01no517_e16.b1 MSMg01no517_e16.b1 CHROMAT_FILE:
MSMg01no517_e16.b1 PHD_FILE: MSMg01no517_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:19 2005
(324 letters)
>mm_chr7_76151387_76152106
Length = 720
Score = 592 bits (306), Expect = e-173
Identities = 315/320 (98%), Gaps = 4/320 (1%)
Strand = Plus / Plus
Query: 5 gaattccagtatatggaaggagggtcacatgcatttaattattttattattcttcaatgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtatatggaaggagggtcacatgcatttaattattttattattcttcaatgt 264
Query: 65 tgtacacccagtgcaccccactcaccctggagatgaaatttccagcggctcatcctagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtacacccagtgcaccccactcaccctggagatgaaatttccagcggctcatcctagat 324
Query: 125 atgcttttctttcttggttgattttcccgttattgttcttagcctgctgctcttgtctat 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgcttttctttcttggctgattttcccgttattgttcttagcctgctgctcttgtctat 384
Query: 185 gtattccgggggtaaaaggttagtgagaagatttagaaatggattggaaatggacttaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtattccgggggtaaaaggttagtgagaagatttagaaatggattggaaatggacttaga 444
Query: 245 gattaaaaaaaaaaaacaattaaatggactctgaataaagctgttgagtggtggagagca 304
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gattaaaaaaaaaaa----ttaaatggactctgaataaagctgttgagtggtggagagca 500
Query: 305 tgctcctcctacggattgca 324
||||||||||||||||||||
Sbjct: 501 tgctcctcctacggattgca 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 720
Length adjustment: 9
Effective length of query: 315
Effective length of database: 711
Effective search space: 223965
Effective search space used: 223965
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_e16.g1 MSMg01no517_e16.g1 CHROMAT_FILE:
MSMg01no517_e16.g1 PHD_FILE: MSMg01no517_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:19 2005
(346 letters)
>mm_chr7_76305166_76305911
Length = 746
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%)
Strand = Plus / Minus
Query: 1 acttgaagaatttagcaagatgtctgtgaatgtaatctctaagatgttaattatgtccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttgaagaatttagcaagatgtctgtgaatgtaatctctaagatgttaattatgtccat 266
Query: 61 tataaaattaggaaaatgttacaaattcctttcaaactgtgttttctacaaaatctttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tataaaattaggaaaatgttacaaattcctttcaaactgtgttttctacaaaatctttta 206
Query: 121 ccttggaggacatatggagggacccatggctctagctgcacatgtaacaaaggatggcct 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccttggaggacgtatggagggacccatggctctagctgcacatgtaacaaaggatggcct 146
Query: 181 tgtcaagcatcaatgggaggagacactcttggtcctgtgaaggcttgatgcccaggtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgtcaagcatcaatgggaggagacactcttggtcctgtgaaggcttgatgcccaggtgta 86
Query: 241 ggggaatgccaagacaaggaggctggagtgtgtgagtgggtaggagagcaccctcataga 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 85 ggggaatgccaagacaaggaggctggagtgtgtgagtgggtgggagagcaccctcataga 26
Query: 301 agcaggaagagggggatgatagaag 325
|||||||||||||||||||||||||
Sbjct: 25 agcaggaagagggggatgatagaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
