Query= MSMg01no521_k24.b1 MSMg01no521_k24.b1 CHROMAT_FILE:
MSMg01no521_k24.b1 PHD_FILE: MSMg01no521_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:06 2005
(579 letters)
>mm_chr7_3397202_3398180
Length = 979
Score = 1087 bits (562), Expect = 0.0
Identities = 574/578 (99%)
Strand = Plus / Plus
Query: 2 ttgactttggttggtgaccagaaagaagtgaggttgaagacacagggtgttgggctgtgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttgactttggttggtgaccagaaagaagtgaggttgaagacacagggtgttgggctgtgg 261
Query: 62 atatagtccttgcaaaggtcctgaggtggcgtgaatctgtgtttggccaacagtgggaga 121
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 262 atatagtccttgcaaaggtcctgaggtagcgtgaatctgtgtttggccaacagtgggaga 321
Query: 122 ccagtgtggctgggacacaatgagaggggagagatgtatggtcgaggagataatagacac 181
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 322 ccagtgtggctgggacacaatgagaggggagagatgtatggtcaaggagataatagacac 381
Query: 182 ttgatcccacaggttcacatatatggcatagaagattcagcttttgcttggagatgggag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttgatcccacaggttcacatatatggcatagaagattcagcttttgcttggagatgggag 441
Query: 242 tccctgaaggttccggagcagagaaaccctgtgagctagcttaagttctaccaggatggc 301
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 442 tccctgaaggttccggagcagagaagccctgtgagctagcttaagttctaccaggatggc 501
Query: 302 tcctgctgctgtgctcagaaatggctacggggagggtggaaagggagaatgtgggagcca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcctgctgctgtgctcagaaatggctacggggagggtggaaagggagaatgtgggagcca 561
Query: 362 gtggtttgaatgcatagtatattccaaagttccccgtgggaaggcactgctgatggagca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtggtttgaatgcatagtatattccaaagttccccgtgggaaggcactgctgatggagca 621
Query: 422 attatggcatctgagagggagagcagggtgaggggtgtctcggaggtggggcttctgaac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 attatggcatctgagagggagagcagggtgaggggtgtctcggaggtggggcttctgaac 681
Query: 482 ctccgccctggtgacattttgggactgagaattctgtgtggcgggggctgagctgtacat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctccgccctggtgacattttgggactgagaattctgtgtggcgggggctgagctgtacat 741
Query: 542 tgtaggacgttgatctgctcctctattctctgtctagt 579
|||||||||||||||||||||||||||||||||||||
Sbjct: 742 cgtaggacgttgatctgctcctctattctctgtctagt 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_k24.g1 MSMg01no521_k24.g1 CHROMAT_FILE:
MSMg01no521_k24.g1 PHD_FILE: MSMg01no521_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:06 2005
(569 letters)
>mm_chr7_3533600_3534568
Length = 969
Score = 814 bits (421), Expect = 0.0
Identities = 455/467 (97%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 103 catagcagggagtccatcataaaatgggacagttttcttgttacggttgcttgtttggtt 162
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 969 catagcagggagtccatcataaaatgggacagttttcttgttacggttgcttgtttggct 910
Query: 163 cggtttgacaggccttgtgtttcccaggctggcctcaaacctgctcttcagctaaagaca 222
| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 909 ctgtttgacaggcct--tgtttcccaggctggcctcaaacctgctctccagctaaaaaca 852
Query: 223 acctcagtctcctgatcctcctgcctctacctgcacagtgctgggattacagacatgtgc 282
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 851 acctcagtctcctgatcctcctgcctctacctgcgcagtgctgagattacagacatgtgc 792
Query: 283 caccagggtgggttttatctgaggtgtcccctatgaacttcacccacactcctagccctg 342
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 791 caccagggtgggttttatctggggtgtcccctatgcacttcacccacactcctagccctg 732
Query: 343 taattacttctttcataacttcagaataagctgagctaacccgtgtccctccatcttgaa 402
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 731 taattacttcttttataacttcagaataagctgagctaactcgtgtccctccatcttgaa 672
Query: 403 catggcaaagcttggtccctgcccactcctgagtcacattgcaaaactgctctagacctt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 catggcaaagcttggtccctgcccactcctgagtcacattgcaaaactgctctagacctt 612
Query: 463 tttgcattcttccagaaacccactctgttagggtaatctacccccacacatattctagca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttgcattcttccagaaacccactctgttagggtaatctacccccacacatattctagca 552
Query: 523 actggctgtgaaggtgtgcccctgtattctcaattgttagttactgt 569
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 actggctgtgaaggtgtgcccctgtattctcaattgttagttactgt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
