NNAACCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAACCTTCATTCTCAAATTGAGCGTTTGGGGTTCATTTTCCC
CTAGTGATGAGAAGGCTTCAAGACCAGTTGACTTTGTGTATAGGCCACAG
CTCAGAGATCAGCGAGGGTTCTGTGTTGTAGCTCAATTACAGAGGACCTA
ACAAATACATAGGAGGTTTTGGGTTCGGTTCCTAACCCTGCAAAAAAAAT
AATTAAAACACTTAATGTTGTTTTAAAAGTAAGAGAATCATTACTTTTTT
CCTCTCATTAATTTCTTGTAAGACAATCTGTACTGTTTCAAATCTGCACC
CTGACGGTTGGGACAGGAAGAGCAACTGAGACAGAGGTTACCCTTTATTT
TTTCAAAGGTACTACTAATGGATTTGCAGGATTTTGAAAATGGCAAATAA
AAAACAAAAATTACACAAGTTTTAAACTTTCTTTTTTTTTTTTTTTTGCC
CTAGAATTAATCATTAACAGAAATGTGAATTTTTGCTTTATATGTAGCCC
AGTTTGATCTTTAGGCTATATTGGAAGGGAAAGTCAAAGGCATTGACTTT
ATGTAGGTTTCAGTATTTTTTGTCTTTTTTTTTTTAAGCAATGTCAGAAA
GCAGAATGAGTCTTATTTCATTCATGATTTTTTTGCTCGCCAAATTCTCA
GCAACTACAAATATTTCAAACCCTAAAATTTAAATACCCCCTTTGGTTAG
GTAAAAAAAAAAN

NCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGCAGGGGATTAAGCTGGA
CCTGCTTGTGTAATCATGCTTAAAAGAACATATATATATTGTGTGAGTTT
GCTGGGTATTCATCAGTGGAGGAATGTACAAAATGTGTTATGTGTGTACA
AGGAGATATGATTCAAGGTCAAAATGGAATATAATTTTGTCACATGCTAA
GAGAACTTTTGTTATAATGTTAAAAAGAAACATGTTATAAATTCTCTCTG
TGTGTGTGCATTCATGGGCATGCATGCCTGAGTGAGTTTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTTTGNNTNNNNNNNNNNNNNNNNN
NNNNTNNNNNNNNTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCT
TCNNCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTNTTTTTT
TTTNTTNNTTTTTTTTTTTTTTTTTCTCCTCTTCCTTTCTTCTTTTTCTT
TTTTTTCTTTTTTTTTTTTTTTTTATTCTCTCCCTCTCCCTTTTTTTATA
CCTATTTTTCTTTTTCTTTTTTTTTTTTTTCCTCTTCTTACTTATATAAT
CTCATTTTTACTTTCCCCTCCCTCTTCTTTTTACCTTTTACCTTTTTAAT
TTTTATATATATTATATCATATACACACTATATTTCATATTTATCAATCT
TTCTTTT

Query= MSMg01no522_f03.b1 MSMg01no522_f03.b1 CHROMAT_FILE:
MSMg01no522_f03.b1 PHD_FILE: MSMg01no522_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:54 2005
         (557 letters)



>mm_chr7_65962239_65963195
          Length = 957

 Score =  998 bits (516), Expect = 0.0
 Identities = 544/554 (98%), Gaps = 3/554 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaccttcattctcaaattgagcgtttggggttcattttcccctagtgatgaga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattcaaccttcattctcaaattgagcgtttggggttcattttcccctagtgaggaga 263

                                                                       
Query: 64  aggcttcaagaccagttgactttgtgtataggccacagctcagagatcagcgagggttct 123
           |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 aggcttcacgatcagttgactttgtgtatagggcacagctcagagatcagcgagggttct 323

                                                                       
Query: 124 gtgttgtagctcaattacagaggacctaacaaatacataggaggttttgggttcggttcc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgttgtagctcaattacagaggacctaacaaatacataggaggttttgggttcggttcc 383

                                                                       
Query: 184 taaccctgcaaaaaaaataattaaaacacttaatgttgttttaaaagtaagagaatcatt 243
           |||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 taaccctgcaaaaaa--taattaaaacacttaatgttgttttaaaagtaagacaatcatt 441

                                                                       
Query: 244 acttttttcctctcattaatttcttgtaagacaatctgtactgtttcaaatctgcaccct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acttttttcctctcattaatttcttgtaagacaatctgtactgtttcaaatctgcaccct 501

                                                                       
Query: 304 gacggttgggacaggaagagcaactgagacagaggttaccctttattttttcaaaggtac 363
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 502 gactgttgggacaggaagagcaactgagacagaggttagcctttattttttcaaaggtac 561

                                                                       
Query: 364 tactaatggatttgcaggattttgaaaatggcaaataaaaaacaaaaattacacaagttt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tactaatggatttgcaggattttgaaaatggcaaataaaaaacaaaaattacacaagttt 621

                                                                       
Query: 424 taaactttcttttttttttttttttgccctagaattaatcattaacagaaatgtgaattt 483
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 622 taaactttcttttttttttttttt-gccctagaattaatcattaacagaaatgtgaattt 680

                                                                       
Query: 484 ttgctttatatgtagcccagtttgatctttaggctatattggaagggaaagtcaaaggca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgctttatatgtagcccagtttgatctttaggctatattggaagggaaagtcaaaggca 740

                         
Query: 544 ttgactttatgtag 557
           ||||||||||||||
Sbjct: 741 ttgactttatgtag 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)