Query= MSMg01no524_a13.b1 MSMg01no524_a13.b1 CHROMAT_FILE:
MSMg01no524_a13.b1 PHD_FILE: MSMg01no524_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:10 2005
(668 letters)
>mm_chr7_36694106_36695178
Length = 1073
Score = 1197 bits (619), Expect = 0.0
Identities = 657/679 (96%), Gaps = 18/679 (2%)
Strand = Plus / Minus
Query: 5 gaattcaccataaattcac---ataaaccccaaatcaaaacaaa-------ggggggggc 54
|||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 921 gaattcaccataaa---accgaataaaccccaaatcaaaacaaagtgggggggggggggc 865
Query: 55 aaagattaaaatctctggcacatcagctgctggcagtgggtggaactggtctgactcagg 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 aaagattaaaatctctggcacatcagctgctggcagtgggtggaactggtctgactcagg 805
Query: 115 cacagaaagaatgcaaaggatatgaggacaggcaagaaactttgaatattgactagatac 174
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 804 cacagaaagaatgcaaaggatatgaggacaggcaagacactttgaatattgactagatac 745
Query: 175 ttaaatattagggaaacttggcttacctcaaagagagccaaagccatgatgtgtatgctt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 744 ttaaatattagggaaacttggcttacctcaaagagagccaaagccatgatgtgtacgctt 685
Query: 235 tttctctctcggagatgtgttcttaattgttaatgaatataaaagtatctgaggatggct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttctctctcggagatgtgttcttaattgttaatgaatataaaagtatctgaggatggct 625
Query: 295 tcagatagtccagagaacaggacagatgggacacagctactgtggatgggcagcgtggac 354
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 624 tcagatagtccagagaacaggacagatgggacacagctactgtggataggcagcgtggac 565
Query: 355 agggacagccatattcctgtgtgtgcttttgcacatttttatgttttctagaataaaaag 414
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agggacagccatattcccgtgtgtgcttttgcacatttttatgttttctagaataaaaag 505
Query: 415 acaaaaaaaaaaaaaaaa-----cagctgtgagagggattctgtagtctgtgtttccacc 469
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 acaaaaaaaaaaaaaaaaaaaaccagctgtgagagggattctgtagtctgtgtttccacc 445
Query: 470 cagggttgtttcctatccctcagagtgggactgtgtgttaaaggaattatgcacacgctt 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagggttgtttcctatccctcagagtgggactgtgtgttaaaggaattatgcacacgctt 385
Query: 530 tgcggggaggcggggttccacacatgtgcatgtgagcaaatgtgtatgcatgcctgggtg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcggggaggcggggttccacacatgtgcatgtgagcaaatgtgtatgcatgcctgggtg 325
Query: 590 tggagctctgaagtgaacattgatgtcttccctcagttgctctccatcttgtttgtttgg 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggagctctgaagtgaacattgatgtcttccctcagttgctctccatcttgtttgtttgg 265
Query: 650 ttggggtttgttgttttgg 668
|||||||||||||||||||
Sbjct: 264 ttggggtttgttgttttgg 246
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1073
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1063
Effective search space: 699454
Effective search space used: 699454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_a13.g1 MSMg01no524_a13.g1 CHROMAT_FILE:
MSMg01no524_a13.g1 PHD_FILE: MSMg01no524_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:10 2005
(636 letters)
>mm_chr7_36507726_36508761
Length = 1036
Score = 1181 bits (611), Expect = 0.0
Identities = 629/635 (99%)
Strand = Plus / Plus
Query: 1 aggaaagctagagggcctttagttgagggacacacagattctagccactggctctcagta 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaaagctagagggccgttagttgagggacacacagattctagccactggctctcagta 260
Query: 61 gcaactgtcatcatcatcaatcatcatcaatattgtcctcatggcatgaaattggtacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaactgtcatcatcatcaatcatcatcaatattgtcctcatggcatgaaattggtacca 320
Query: 121 acagcatcagacctgcccttgttccttattagctaagtggtggaaaccagcccatgttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagcatcagacctgcccttgttccttattagctaagtggtggaaaccagcccatgttag 380
Query: 181 ccagggtaccgaggccacggaggcccacaccaaactcctcctcactgttctctagatgct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ccagggtaccgaggccacggaggcccacaccaagctcctcctcactgttctctagatgct 440
Query: 241 gtaggcaaacactttctttgcttttaaagatttttgttttatgtatatgaatgttttgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaggcaaacactttctttgcttttaaagatttttgttttatgtatatgaatgttttgcc 500
Query: 301 agcagtggccagaagagggcactgcatcccctagaactggagttacaggccatcatgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagtggccagaagagggcactgcatcccctagaactggagttacaggccatcatgatc 560
Query: 361 tgcagtgtgggtactgagaaccaaacctaggtcctctgcaagagcagccagggtcaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcagtgtgggtactgagaaccaaacctaggtcctctgcaagagcagccagggtcaagcc 620
Query: 421 atctctccagtccccaaggctctccccttcttagtggtttatgtctgacactgaggcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctctccagtccccaaggctctccccttcttagtggtttatgtctgacactgaggcttg 680
Query: 481 ctgatggccttttcaaatgaattaccccactggaatgtagtcctccttcagaaggcaaga 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 ctgatggccttttcaaatgaattaccccactggaatgtagtcctcctccagaaggcaaga 740
Query: 541 ggaggtaagctttcacctctgtttaattcaatcagttctgagaaacacacatgcacagac 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 ggaggtaagctttcacctctttttaattcaatcagttctgagaaacacacatgtacagac 800
Query: 601 tgagtaattgataacaacctcaaaaaaaaaaaaaa 635
|| ||||||||||||||||||||||||||||||||
Sbjct: 801 tgggtaattgataacaacctcaaaaaaaaaaaaaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
