Query= MSMg01no525_j08.b1 MSMg01no525_j08.b1 CHROMAT_FILE:
MSMg01no525_j08.b1 PHD_FILE: MSMg01no525_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:15 2005
(582 letters)
>mm_chr7_20419685_20420666
Length = 982
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 1 ggcttgaaggcaagcatctttatctgttgagacatctcactgatccctaaaagccccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggcttgaaggcaagcatctttatctgttgagacatctcactgatccctaaaagccccctt 259
Query: 61 gggagactttatgggaagaggggacagctactagcgctctctcagcttcagcatccttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggagactttatgggaagaggggacagctactagcgctctctcagcttcagcatccttac 319
Query: 121 ttatgaagtggggtagaacatataccttataagatagttgtgagggttaagagggcccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttatgaagtggggtagaacatataccttataagatagttgtgagggttaagagggcccag 379
Query: 181 cccctctcagaacaggcctggaacagtatgagttccagaaaaaagggtcaggttgtagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccctctcagaacaggcctggaacagtatgagttccagaaaaaagggtcaggttgtagtg 439
Query: 241 gaaaactcctgttatcccagcaattggaaggcagggggaagaagatacatgggagacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaaactcctgttatcccagcaattggaaggcagggggaagaagatacatgggagacatg 499
Query: 301 gcaaaatggtgaaaacaaacaagtaaaacccagaa-gcccaaaagggaggtgactaagcc 359
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 gcaaaatggtgaaaacaaacaagtaaaacccagaaagcccaaaagggaggtgactaagcc 559
Query: 360 gtagagcccctgcctagaatttccccagtgagtggattgtcactgggtatatcaaccgcg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 560 gtagagcccctgcctagaatttccccagtgagtggattgtcactgggtatatcaaccgag 619
Query: 420 ttccaggcaggctccactcccaggatcaattggccaacacaaatggactccatgttttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttccaggcaggctccactcccaggatcaattggccaacacaaatggactccatgttttct 679
Query: 480 tgctttgtttatatattttttttacttacttgcttttgtttttggattttttgttttgag 539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 680 tgctttgtttatatattttttttacttacttgtttttgtttttggattttttgttttgag 739
Query: 540 aggagggagatgaagtatgtaggaaaggggcaggatctgagag 582
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 aggagggagatgaagtaggtaggaaaggggcaggatctgagag 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_j08.g1 MSMg01no525_j08.g1 CHROMAT_FILE:
MSMg01no525_j08.g1 PHD_FILE: MSMg01no525_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:15 2005
(638 letters)
>mm_chr7_20586471_20587508
Length = 1038
Score = 1060 bits (548), Expect = 0.0
Identities = 548/548 (100%)
Strand = Plus / Minus
Query: 91 gtttagatagccctgttatgtcctcacattcccctttatcttatggtcaagatgttccca 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gtttagatagccctgttatgtcctcacattcccctttatcttatggtcaagatgttccca 979
Query: 151 ggaatgttttaactacggggcatacccaggtttgtttttctttttttctcagccccaggc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 ggaatgttttaactacggggcatacccaggtttgtttttctttttttctcagccccaggc 919
Query: 211 agcctctaagctcacaaacaaccagcaatttctgagtactttatatgacttacagatctt 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 agcctctaagctcacaaacaaccagcaatttctgagtactttatatgacttacagatctt 859
Query: 271 gaaatttcatctttctttcacctcttgtagttaatgactattttaattataataatggtg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaaatttcatctttctttcacctcttgtagttaatgactattttaattataataatggtg 799
Query: 331 ttgagtataagtatggccatggagaagaagatgctgaagatgacagggatgtaaaggatg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttgagtataagtatggccatggagaagaagatgctgaagatgacagggatgtaaaggatg 739
Query: 391 atagtgtttataataatgaaggaagttagtatgtgttttgctcttctaaatataaatatt 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atagtgtttataataatgaaggaagttagtatgtgttttgctcttctaaatataaatatt 679
Query: 451 taacatgactgtacatacattgtatatacatcagcttctcagaaaagagcaagagaaatg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 taacatgactgtacatacattgtatatacatcagcttctcagaaaagagcaagagaaatg 619
Query: 511 tagcctcaatccaatcttgtggactgtttgagaatgcttcccaagaaggcctggtaacgc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tagcctcaatccaatcttgtggactgtttgagaatgcttcccaagaaggcctggtaacgc 559
Query: 571 tattgaacacacattatccaggacagacatgggatatggtgttgagcctgtttctatggg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tattgaacacacattatccaggacagacatgggatatggtgttgagcctgtttctatggg 499
Query: 631 tcaatcag 638
||||||||
Sbjct: 498 tcaatcag 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
