Query= MSMg01no525_m20.b1 MSMg01no525_m20.b1 CHROMAT_FILE:
MSMg01no525_m20.b1 PHD_FILE: MSMg01no525_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:32 2005
(470 letters)
>mm_chr7_123468353_123469221
Length = 869
Score = 420 bits (217), Expect = e-121
Identities = 308/359 (85%), Gaps = 34/359 (9%)
Strand = Plus / Minus
Query: 5 gaattcccaggtcatgataaccgtccctccctgaggcagagccatctggggagtttgagc 64
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaattcccaggtcaggataacggtccctccctgaggcagagccatctggggagtttgagc 293
Query: 65 tcgggctaacattgcagttctaagtatggtggcaggctttgccatagttgtctccatagg 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 292 tcgggctaacattgcagttctaagtaaggtggcaggctttgccatagttgtctccatggg 233
Query: 125 gttttttggttttttgttttgttttgtttttt---------------------------t 157
| ||| ||||||||||||||||||||||||| |
Sbjct: 232 gctttg-ggttttttgttttgttttgttttttggtttggtttggtttggtttggtttttt 174
Query: 158 ggtttttcgagacagggtttctctgtatagccctggctgtcctggaactcactctgtaga 217
|||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 173 ggtttttcaagacagggtttttctgtatagccctggctgtcctggaactaactttgtaga 114
Query: 218 ccaggctggcctcaaactcagaaacccacctgcctctgcctcccgagtactgggattaaa 277
|||||||||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct: 113 ------tggcctcaaactcagaaatccacctgtctctgcctctcgagtactgggattaaa 60
Query: 278 ggcgtgcgccaccacgcccagctcgtagttgttttttaattgccaataattcctttaaa 336
||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||
Sbjct: 59 ggcgtgcaccaccacgcccggctcatagttgttttttaattgccaataatttctttaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_m20.g1 MSMg01no525_m20.g1 CHROMAT_FILE:
MSMg01no525_m20.g1 PHD_FILE: MSMg01no525_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:32 2005
(583 letters)
>mm_chr7_123272587_123273569
Length = 983
Score = 1104 bits (571), Expect = 0.0
Identities = 580/583 (99%)
Strand = Plus / Plus
Query: 1 atttgaaacaaagcctagcaaattattaccagtcagcctggcctgggtcttgtcatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 atttgaaacaaagcctagcaaattattaccagtcagcctggcctgggtcttctcatggct 260
Query: 61 gagctaccacctgagatggagtctgtgagacttctagatttgagcaagtaggggctgacc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagctatcacctgagatggagtctgtgagacttctagatttgagcaagtaggggctgacc 320
Query: 121 ttgaccgggcaaggatattccgtatcttctccgccttttggtaccgtgcctgcagctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaccgggcaaggatattccgtatcttctccgccttttggtaccgtgcctgcagctcct 380
Query: 181 ccaggctgggtggttcctcggggtctagttccacatatcgctcggggatggagaccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaggctgggtggttcctcggggtctagttccacatatcgctcggggatggagaccttct 440
Query: 241 ctggtttagacagctggggagaggatcaggtggcagggtggagggtaagcgcagatgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggtttagacagctggggagaggatcaggtggcagggtggagggtaagcgcagatgctc 500
Query: 301 tggtctgagacatgttttcccacccttcctaccctgtgaggaagcatcaaagtctacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtctgagacatgttttcccacccttcctaccctgtgaggaagcatcaaagtctacaga 560
Query: 361 tgtcattcccaccctgttccccctcccttaacagcatagtcgcccaccatcagactggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcattcccaccctgttccccctcccttaacagcatagtcgcccaccatcagactggtg 620
Query: 421 gcctgagagcatgatggtgacggggtgatggagacctcaggggaagggagacaggcttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctgagagcatgatggtgacggggtgatggagacctcaggggaagggagacaggcttca 680
Query: 481 ctgagtgcttgtttaattggggagaaacagaggctatttaaccctctgaggagtgggtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgagtgcttgtttaattggggagaaacagaggctatttaaccctctgaggagtgggtaa 740
Query: 541 aggctttgcggttgagtgtgcatcactggctggggcaaaggtg 583
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 aggctttgcggttgagtgtgcatcactggctgggccaaaggtg 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
