Query= MSMg01no526_b04.b1 MSMg01no526_b04.b1 CHROMAT_FILE:
MSMg01no526_b04.b1 PHD_FILE: MSMg01no526_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:53 2005
(658 letters)
>mm_chr7_85205726_85206783
Length = 1058
Score = 1168 bits (604), Expect = 0.0
Identities = 640/656 (97%), Gaps = 10/656 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcaatctcagtgcagcaattaacctataataccacctatgagattgacatact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcaatctcagtgcagcaattaacctataataccacctatgagattgacatact 264
Query: 65 attagccttaatttacagatggtcaagacattgcttccaaggttaaagtgatttgcccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attagccttaatttacagatggtcaagacattgcttccaaggttaaagtgatttgcccag 324
Query: 125 aggcaccagtttggaagaaggtagaaccagggagtagaaaatgaatagtttgatttctaa 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 aggcaccagtttggaagaaggtagaaccagagagtagaaaatgaatagtttgatttctaa 384
Query: 185 caacaccttcttgatatcatgttttttattttaaattcttaaatgaaattccaagatcca 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caacaccttcttgatgtcatgttttttattttaaattcttaaatgaaattccaagatcca 444
Query: 245 ggtgtgtaagagaagagataatagtgcaggaagtgaagggttagggctcaaggagatgga 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtgagtaagagaagagataatagtgcaggaagtgaagggttagggctcaaggagatgga 504
Query: 305 ggacagggcagggcagcaagaaaatagttcagaaaataagggtgcaagaggagaatacta 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 ggacagggcagggcagcaagaaaatagttcagaaaataagggtgcatgaggagaatacta 564
Query: 365 caactgacaacagataggctgaaggaataggcaggacagttcagttagtcttcacaaact 424
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caattgacaacagataggctgaaggaataggcaggacagttcagttagtcttcacaaact 624
Query: 425 tatccacttgatttcctgtggcccatattaagatgctctaacccagaagacagagccctt 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatccacttgatttcctatggcccatattaagatgctctaacccagaagacagagccctt 684
Query: 485 tgccctttttaccatggagagagagatttgatgggggg--acaggggcaggaagttgtgt 542
| || |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 685 t---ct----accatggagagagagatttgatggggggggacaggggcaggaagttgtgt 737
Query: 543 gtctgtgtgtgcctgccctgaaccttttctgcaagccttttgcatttcgcagtaaagatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 738 gtctgtgtgtgcctgccctgaaccttttctgcaagccttttgcatttcgcagtaa-gatt 796
Query: 603 tcaaaaccataaattatgtacagtcagaaagctaaaagggcagggcctttctggag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tcaaaaccataaattatgtacagtcagaaagctaaaagggcagggcctttctggag 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_b04.g1 MSMg01no526_b04.g1 CHROMAT_FILE:
MSMg01no526_b04.g1 PHD_FILE: MSMg01no526_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:53 2005
(630 letters)
>mm_chr7_85383489_85384518
Length = 1030
Score = 1195 bits (618), Expect = 0.0
Identities = 627/630 (99%)
Strand = Plus / Minus
Query: 1 ctttgaaactattcagttctgaacaatccagaactcacacgtgggtaaaaccttagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 ctttgaaactattcagttctgaacaatccagaactcacacgtgggtaaaaccttagttaa 771
Query: 61 ttttctctggcaaggtttggaatagactaggctaaaggaggcaggggaattctctttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ttttctctggcaaggtttggaatagactaggctaaaggaggcaggggaattctctttaga 711
Query: 121 ctccacagtgcctggactgtcccattatctgttcatttcttcagctctggtataggttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ctccacagtgcctggactgtcccattatctgttcatttcttcagctctggtataggttgt 651
Query: 181 atagtgctcattagaagacatggcacagagtggacttctctgcagacagatgctgtatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atagtgctcattagaagacatggcacagagtggacttctctgcagacagatgctgtatta 591
Query: 241 tagtcactttgagtgaatttagagacagaacttaaatgctaatgcctattaatctgtgca 300
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 590 tagtcactttgaatgaatttagagacacaacttaaatgctaatgcctattaatctgtgca 531
Query: 301 aagctgccaagagaaaggaacacaaaggagggaatcagtagctaattatagtagggattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 530 aagctgccaagagaaaggaacacaaaggagggaatcagtagctaattatagtaggaattg 471
Query: 361 caacctcacttcctcgattaaaactagtggatatgaacactcattatctaccaaataaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 caacctcacttcctcgattaaaactagtggatatgaacactcattatctaccaaataaca 411
Query: 421 gacattgtagaaatgtagacatctagtgaaggatggaaatgcttttagaactctggtgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gacattgtagaaatgtagacatctagtgaaggatggaaatgcttttagaactctggtgtc 351
Query: 481 agtgactgctctgtgtctatcaaggcatcacatctattgtaaaatgtcaagcttggtctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agtgactgctctgtgtctatcaaggcatcacatctattgtaaaatgtcaagcttggtctg 291
Query: 541 tagttctatatttctttttcatattgtgtcttctgtggggataaattcttcatatgatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tagttctatatttctttttcatattgtgtcttctgtggggataaattcttcatatgatgg 231
Query: 601 taagagtggaggaagctgcattttggtcca 630
||||||||||||||||||||||||||||||
Sbjct: 230 taagagtggaggaagctgcattttggtcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
