Query= MSMg01no526_h08.b1 MSMg01no526_h08.b1 CHROMAT_FILE:
MSMg01no526_h08.b1 PHD_FILE: MSMg01no526_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(672 letters)
>mm_chr7_125719771_125720842
Length = 1072
Score = 806 bits (417), Expect = 0.0
Identities = 444/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 220 ggttgctcagtggttaggagcactggctaagcttgcagaagttccatgttcagcacccca 279
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 1072 ggttgctcagtggttaggagcactggctatgcttgcagaagttccatgttcagca-ccta 1014
Query: 280 catggcagctcagcactccctgtgactccagttacaggggatccgacattcccacacaga 339
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 cgtggcagctcagcactccctgtgactccagttacaggggatccgacattcccacacaga 954
Query: 340 catacgtgcaagccaaacaccaatacacgtaaaacaaaaacgaattattatgaaaacaaa 399
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 953 catacgtgcaagccaaacaccaatacacataaaacaaaaacgaattattatgaaaacaaa 894
Query: 400 acaaaacaaaacaaaacaaaaagaaaaactctggctactgaatgaggctctaagtccagc 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 acaaaacaaaacaaaacaaaaagaaaaactctggctactgaatgaggctctaagtccagc 834
Query: 460 atcctgcgacccaaggaagagagcaagaacctcttcgttttgtagttgtattttatttct 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 atcctgcgacccaaggaagagagcaagaacctcttcgttttgtagttgtattttatttct 774
Query: 520 tccagtgtgcccttccaaaaatggtaaccttcatctgtatatctagggacacagctctgt 579
|||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 773 tccagtgtgcccttccaaaaatggtaacctacatctatctatctagggacacagctctgt 714
Query: 580 gataagtctccaggccaggtgtgggcttcctctaacatctaaacttggaagctccccgaa 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gataagtctccaggccaggtgtgggcttcctctaacatctaaacttggaagctccccgaa 654
Query: 640 tcgtatccatggtgactgctgatgtgggggcag 672
| |||||||||||||||||||||||||||||||
Sbjct: 653 ttgtatccatggtgactgctgatgtgggggcag 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h08.g1 MSMg01no526_h08.g1 CHROMAT_FILE:
MSMg01no526_h08.g1 PHD_FILE: MSMg01no526_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(627 letters)
>mm_chr7_125518229_125519256
Length = 1028
Score = 1160 bits (600), Expect = 0.0
Identities = 621/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 tggacacaatgaagggcagttctcccatccacagtggacaacaaggatacttaagacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggacacaatgaagggcagttctcccatccacagtggacaacaaggatacttaagacagg 260
Query: 61 aaaggaatgcttcttccttgcagtta-tttttggtttgataggaacaaagttccagtgcc 119
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 261 aaaggaatgcttcttccatgcagttatttttttgtttgataggaacaaagttccagtgcc 320
Query: 120 tcaaatggctggttggtcttagtgccctagatggacctataccttcagtagaggcagggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaatggctggttggtcttagtgccctagatggacctataccttcagtagaggcagggt 380
Query: 180 ataggtctgtagtttgtgtcaagtctggggggtgtggtcaaaatcccaagatgttctgga 239
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataggtccgtagtttgtgccaagtctggggggtgtggtcaaaatcccaagatgttctgga 440
Query: 240 gttggtctgaactcagagcggcagcagaggaggaagagaggaattctttctccaagaggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttggtctgaactcagagcggcagcagaggaggaagagaggaattctttctccaagaggt 500
Query: 300 gagcaggctcaaggggtcctggggaatgaacgtatcttcaaaactccccatctctgttct 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcaggctcatggggtcctggggaatgaacgtatcttcaaaactccccatctctgttct 560
Query: 360 ccacccacctttattcttttaacttgggtccccacaccacagagtggtgaagtggtccag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccacccacctttattcttttaacttgggtccccacaccacagagtggtgaagtggtccag 620
Query: 420 gcatctcttttcccacctcctacctgaggaggaggaggatgctaattaaaacaatgggta 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 gcatctcttttcccacctcctacctgaggaggaggaggatgctaattaaaacaatgggca 680
Query: 480 gtccaaagcagggcaccttgggctctggtttctatagaaacgcagtcctcctttcacctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtccaaagcagggcaccttgggctctggtttctatagaaacgcagtcctcctttcacctt 740
Query: 540 tcaacacatctctctgtctcctgacaaactctattcctggagatgtggatggctctgatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaacacatctctctgtctcctgacaaactctattcctggagatgtggatggctctgatc 800
Query: 600 tgagctgccagtgttcctacttgtcccc 627
||||||||||||||||||||||||||||
Sbjct: 801 tgagctgccagtgttcctacttgtcccc 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space: 628106
Effective search space used: 628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
