Query= MSMg01no527_i12.b1 MSMg01no527_i12.b1 CHROMAT_FILE:
MSMg01no527_i12.b1 PHD_FILE: MSMg01no527_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:48 2005
(367 letters)
>mm_chr7_94874053_94874819
Length = 767
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcattttttcctaaacatcaactccagccctaagtaaatgacactctcttctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggaattctcattttttcctaaacatcaactccagccctaagtaaatgacactctcttctt 258
Query: 64 ctgtagcctacctctttacatttgatcattgcctttactatgaaaagttaatctttttcc 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctgtagcctacctctttatatttgatcattgcctttactatgaaaagttaatctttttcc 198
Query: 124 tcaagcagtttcaaaggtacaggtcttgcaggagtggtttttatttaaattgaattgttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaagcagtttcaaaggtacaggtcttgcaggagtggtttttatttaaattgaattgttt 138
Query: 184 tttgtgtatcat-aaaaaaatgtggatctattttgattcttttatacagggaaactcagt 242
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tttgtgtatcataaaaaaaatgtggatctattttgattcttttatacagggaaactcagt 78
Query: 243 gttagagttccatttgctaaagagcctgtcttttccaatatgtgctgtttcagaactctg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gttagagttccatttgctaaagagcctgtcttttccaatatgtgctgtttcagaactctg 18
Query: 303 tcaaaatttagataggg 319
|||||||||||||||||
Sbjct: 17 tcaaaatttagataggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_i12.g1 MSMg01no527_i12.g1 CHROMAT_FILE:
MSMg01no527_i12.g1 PHD_FILE: MSMg01no527_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:48 2005
(667 letters)
>mm_chr7_94704768_94705833
Length = 1066
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%), Gaps = 3/668 (0%)
Strand = Plus / Plus
Query: 1 atatgatgttgggatggtttagctttgtgtgctgtaaatccaaaggggctaggactaggg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 atatgatgttgggatggtttagctttgtgtgctgtaaatccaaagaggctaggactaggg 260
Query: 61 tataagaatgagcgttattgaaatgatgcattttaggatgtacaatgtaacagacttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataagaatgagcgttattgaaatgatgcattttaggatgtacaatgtaacagacttcaa 320
Query: 121 tgaaagtgtttgatacccccccattgacaatcagcaataaacacatacatatgcatagca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tgaaagtgtttgatacccccc-attgacaatcagcaataaacacatacatatgtatagca 379
Query: 181 ccaaatggattcagcaggatttatttatatatttatatgtatgtatgaatgcaacagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccaaatggattcagcaggatttatttatatatttatatgtatgtatgaatgcaacagtaa 439
Query: 241 caacttaagaataaaggctataaaacaggtaaaaaatattgactattaaataaaagtata 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 440 caacttaagaataaaggctataaaacaggtaaaaa-tattgactattaaataaaagtata 498
Query: 301 tagataacctttcctttgcattgttagaaacatgtccccatttaacaatattatacatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tagataacctttcctttgcattgttagaaacatgtccccatttaacaatattatacatat 558
Query: 361 tttgttctatgtcactgggaatgtgactttaatggaagaatgggcttgcattatcttact 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 tttgttctatgtcactgggaatgtgactttaatggaagaatggacttgcattatcttact 618
Query: 421 acagtgatcagtgaaatttgctgtatcttataatcactcgggtgctgtaaaagtcctcca 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acagtgatcagtgaaatttgttgtatcttataatcactcgggtgctgtaaaagtcctcca 678
Query: 481 aaaccattcttcacttaaccaatttaactatttgccaattgtgctagttatatatttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaaccattcttcacttaaccaatttaactatttgccaattgtgctagttatatatttttt 738
Query: 541 -gccagtgtgcttatagtagcagaggtatcttattctaaatttgcttgacagaactgcaa 599
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgccagtgtgcttataatagcagaggtatcttattctaaatttgcttgacagaactgcaa 798
Query: 600 tatttgtgtaatagctgactaaaacaaaacaacaaaggaaaaattcttctgcctctttct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tatttgtgtaatagctgactaaaacaaaacaacaaaggaaaaattcttctgcctctttct 858
Query: 660 cttccatg 667
||||||||
Sbjct: 859 cttccatg 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space: 693792
Effective search space used: 693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
