Query= MSMg01no528_o09.b1 MSMg01no528_o09.b1 CHROMAT_FILE:
MSMg01no528_o09.b1 PHD_FILE: MSMg01no528_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:38 2005
(640 letters)
>mm_chr7_87092460_87093499
Length = 1040
Score = 640 bits (331), Expect = 0.0
Identities = 349/357 (97%), Gaps = 5/357 (1%)
Strand = Plus / Minus
Query: 289 cctcagaatccacacgggaacaacagagaactgactcctgcaagctgtcctctgaccttg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 cctcagaatccacacgggaacaacagagaactgactcctgcaagctgtcctctgaccttg 981
Query: 349 tactgtgtgttattagtgcacacacacgcacacacacacacacacaggacacccc----a 404
||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |
Sbjct: 980 tactgtgtgttattagtgcacacacacacacacacacacacacagaggacagcccaaata 921
Query: 405 aataataaaagcaaaagtgaaaatgatttaaaaccaattaaaaatttaaaatagaataaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 aataataaaagcaaaagtgaaaatgatttaaaaccaattaaaaatttaaaatagaataaa 861
Query: 465 ctttaaagt-aaaaaaaattcaatttagaactgcattttaattgtacaataagaaataag 523
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ctttaaagtaaaaaaaaattcaatttagaactgcattttaattgtacaataagaaataag 801
Query: 524 tgtgggtacattcaatggtaccatttatatattaaaaatagattctggaaaattcatcaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgtgggtacattcaatggtaccatttatatattaaaaatagattctggaaaattcatcaa 741
Query: 584 acattaacaattataattttgaatggaatgtgtatatggatacttttcattctttta 640
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 acattaacaattataattttgaatggaatgtgtatatggatacttttcattctttta 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_o09.g1 MSMg01no528_o09.g1 CHROMAT_FILE:
MSMg01no528_o09.g1 PHD_FILE: MSMg01no528_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:38 2005
(572 letters)
>mm_chr7_86896723_86897694
Length = 972
Score = 1083 bits (560), Expect = 0.0
Identities = 569/572 (99%)
Strand = Plus / Plus
Query: 1 acagaattaaccgcatgaggagcctagtggggtgaagacacacagaaaggtaagggagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaattaaccgcatgaggagcctagtggggtgaagacacacagaaaggtaagggagga 260
Query: 61 gctttctctcaaaggagcttgtgaacccaacatatccacatcaaacagctgtgcatgtga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gctttctctcaaaggagcttgtgaacccaacatatccacatcaaacagctgtgcgtgtga 320
Query: 121 aaaagtgtgggatgatgggcagagctgggggctgggagcgcaggacagaccacttagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagtgtgggatgatgggcagagctgggggctgggagcgcaggacagaccacttagatg 380
Query: 181 ctgtgcttataggagacttccaggagagcaacactagctaagtatgaggggactgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgcttataggagacttccaggagagcaacactagctaagtatgaggggactgggaag 440
Query: 241 atgaacagactaaatatttcaaagtaaggtagaggaaggctgggagaccaagggcagcat 300
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaacagattaaatatttcaaagtaaggtagaggaaggctgggagaccaagggcagcat 500
Query: 301 aggccacatggggctgcagagcacaggcaggatgggaagattagagtcagatgctgtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggccacatggggctgcagagcacaggcaggatgggaagattagagtcagatgctgtgcc 560
Query: 361 ccagcccttcctggctctccagtctcacagtctcttattttcctgttccaggtattgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagcccttcctggctctccagtctcacagtctcttattttcctgttccaggtattgtga 620
Query: 421 gattgttttacctgtgtaaggacagtctttatcacatcaaggccatcaatgaagtggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gattgttttacctgtgtaaggacagtctttatcacatcaaggccatcaatgaagtggtga 680
Query: 481 gttcctttcttttcccgttagccggagaacatcaagaaggtacaaagcaccaggcagtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcctttcttttcccgttagccggagaacatcaagaaggtacaaagcaccaggcagtgg 740
Query: 541 tggtgcacgcctttaatcccagcacttgggag 572
||||||||||||||||||||||||||||||||
Sbjct: 741 tggtgcacgcctttaatcccagcacttgggag 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
