AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTCTAATGTTGAGCCACTCTGTGCCAGTACTGGTCTCTCTCTCTCTCT
TTGTTTTGTTTTGTTTTGTTTTTTTTTTTTTTGTGTTCCAACAAAACTGT
ATTTGCAAAAACAGACAGCAGTCACGACTTTGCTAGACTCCATTCCAGTT
CACTCCAATGTGCAAATAAAATGTCAATGGCTTTTTTCTTCTCAGATTTT
TACACTCTTGATTACATACACTGAGGAAGAGGTCTTTGCAGTGAAATTCT
TGAAGATAAGAGAAGCCCCTCGTCGGGCGTGGTGGAACACGCCTTTAATC
CCAGCACTAGGGAGGCAGAGACAGGCGGATTTCTGAGTTCGAGGCCAGCC
TGGTCTACAAAGTGAGCCCCAGGACAGCCAGGGCTATACAGAGAAAACCT
TCAGATAACAACAAAGCCCATCTCCTTTAAGATTCCCTTGATCATCTTTG
TACAGTTTAACTTTAAACTCTTCAGTCTGAGGATCTCTCATAATAATGCC
AAATTTGGACATGAGCTGAATAAATTCATCCACTGTGATGTCTGGAGGGA
GACCTGACACGTATACATTTGTATTTCTGTCTTCTTCAACATGGAACCAT
CCAGATTCAGCCTTTCTCTTTTCCCCCTTCCTTTTGGAGTCAAGGGTCTC
CGGGACATCTTTTTGTGGAGGGTCTTCTACAGCCTTATTGCTGGGGCCCT
GGACTTTCACAATATAACATGGATGG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCCCGAAATACTCACTCCATAATTTATTAGCAGAATCACCA
GGACAAATTATTTAAACTCTCTTCCCCAGTTCATTCTTTAAGGAATCTTC
TTGGTTTGAGACAGCAGCTGGAGTTGGCAGCTGTCCTGACCCAGTACCCA
AGCTGCATAAGAACTGGCATTTCTGGAAAACAGTTGGATGGGTTCTAAGC
AGCTAAACACATACCATGCATGCAACCTGCTTCCCATCAGCAGTCTCTGT
CTCCGCTCTGAATTGCAGCATATGCTCACCCTTTTCTCAAAGCTCCGTTA
TTAGTCACATTTATAAACGCAGGTCATCCATGGAAACCGGTCTGTCCCTG
AGCAGCAGACAATGGCCCCCAACACACCCACAATCTGAAAGAGAACCACG
GCTGACCAGCTGAATTGTTCATTCAGTAACCAGGAGCAGAAAGGGCAGCA
TCTCTCAGTTTCCCAGAGAGGACCAGAGAGGAAAGGTCAAATAGAATGTT
GTCACCAAGGCCAGTACCTGAACCAGTCTCCCTGGGATCTTGGGATGGAA
AATGGACTTTCTCTTCCCACTCTGAGCCTCCCTTTATCTTTCCACTTTGT
GCATAGCCTCATCCGTGTGCTGTTAGCAATGACCTTAACATTTGCTAAAT
TCCCGTGTTGTCTTCCTCATGAGTAAACTCANGACAGGTAATCCATTCTC
CGTGAGATAACAGGATA

Query= MSMg01no529_j22.b1 MSMg01no529_j22.b1 CHROMAT_FILE:
MSMg01no529_j22.b1 PHD_FILE: MSMg01no529_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:40 2005
         (532 letters)



>mm_chrX_54309903_54310834
          Length = 932

 Score =  580 bits (300), Expect = e-170
 Identities = 315/320 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttgtgttccaacaaaactgtatttgcaaaaacagacagcagtcacgactttgctagactc 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttgtgttccaacaaaactgtatttgcaaaaacagacagcagtcacgactttgctagactc 424

                                                                       
Query: 149 cattccagttcactccaatgtgcaaataaaatgtcaatggcttttttcttctcagatttt 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cattccagttcactccaatgtgcaaataaaatgtcaatggcttttttcttctcagatttt 364

                                                                       
Query: 209 tacactcttgattacatacactgaggaagaggtctttgcagtgaaattcttgaagataag 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tacactcttgattacatacactgaggaagaggtctttgcagtgaaattcttgaagataag 304

                                                                       
Query: 269 agaagcccctcgtcgggcgtggtggaacacgcctttaatcccagcactagggaggcagag 328
           |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 303 agaagcccctcgccgggcgtggtggaacacgcctttaatcccagcactacggaggcagag 244

                                                                       
Query: 329 acaggcggatttctgagttcgaggccagcctggtctacaaagtgagccccaggacagcca 388
            |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 243 tcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagcca 184

                               
Query: 389 gggctatacagagaaaacct 408
           ||||||||||||||||||||
Sbjct: 183 gggctatacagagaaaacct 164


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no529_j22.g1 MSMg01no529_j22.g1 CHROMAT_FILE:
MSMg01no529_j22.g1 PHD_FILE: MSMg01no529_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:40 2005
         (618 letters)



>mm_chr7_96830253_96831270
          Length = 1018

 Score = 1133 bits (586), Expect = 0.0
 Identities = 610/618 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactccataatttattagcagaatcaccaggacaaattatttaaactctcttccccagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactccataatttattagcagaatcaccaggacaaattatttaaactctcttccccagtt 260

                                                                       
Query: 61  cattctttaaggaatcttcttggtttgagacagcagctggagttggcagctgtcctgacc 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattttttaaggaatcttcttggtttgagacagcagctggagttggcagctgtcctgacc 320

                                                                       
Query: 121 cagtacccaagctgcataagaactggcatttctggaaaacagttggatgggttctaagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtacccaagctgcataagaactggcatttctggaaaacagttggatgggttctaagca 380

                                                                       
Query: 181 gctaaacacataccatgcatgcaacctgcttcccatcagcagtctctgtctccgctctga 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctaaacacataccacgcatgcaacctgcttcccatcagcagtctctgtctccgctctga 440

                                                                       
Query: 241 attgcagcatatgctcacccttttctcaaagctccgttattagtcacatttataaacgca 300
           ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 attgcagcaaatgctcacccttttctcaaagctccattattagtcacatttataaacgca 500

                                                                       
Query: 301 ggtcatccatggaaaccggtctgtccctgagcagcagacaatggcccccaacacacccac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtcatccatggaaaccggtctgtccctgagcagcagacaatggcccccaacacacccac 560

                                                                       
Query: 361 aatctgaaagagaaccacggctgaccagctgaattgttcattcagtaaccaggagcagaa 420
           || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacctgaaagaaaaccacggctgaccagctgaattgttcattcagtaaccaggagcagaa 620

                                                                       
Query: 421 agggcagcatctctcagtttcccagagaggaccagagaggaaaggtcaaatagaatgttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 agggcagcatctctcagtttcccagagaggaccagagaggaaaggtcaagtagaatgttg 680

                                                                       
Query: 481 tcaccaaggccagtacctgaaccagtctccctgggatcttgggatggaaaatggactttc 540
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 tcaccaaggccagtacctgaaccagtctccctggggtcttgggatggaaaatggactttc 740

                                                                       
Query: 541 tcttcccactctgagcctccctttatctttccactttgtgcatagcctcatccgtgtgct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcttcccactctgagcctccctttatctttccactttgtgcatagcctcatccgtgtgct 800

                             
Query: 601 gttagcaatgaccttaac 618
           ||||||||||||||||||
Sbjct: 801 gttagcaatgaccttaac 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)