NNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAGAATAATTTACTAAATTATATTTAAGATATTTAAACT
GCCAAAAAAATTCTTCCTTCTCCAGCCATTGTTTCTGTAATATTTACACA
AGTGAATGGCCTCTGGGTCACACTGGAAACCCAGAGTAATATGGCCTCGC
CTAGCATAGCAAATTTCCTTCCTTTTGACATGTTCAGGAGGTGTAGGTGT
AGGCTCTGGGTTCTAAGGATTGTCTGCAAGGGCCCATCTCCATGTTTTGG
CAGCAGCAGGACAAAGCCTTTTACCCAGTGACCTCTCCTGGGCTGAGAAT
GCAGAGGCTTGGGCACAGATTGTACCGTGCAGTACCTACCCCACGTGACT
TGTCCTGTTCTTACTCTGTTCTCAGGCCTTACAGGGAAATCCTGGGTGAA
TAGTTTCTGGATAAATAAAGATGTATGGGACTTCTGTAATTTTCTGAAGT
CCCCTTGCTAAATTGGTTGGGCCTCTGTAGGATCAGAGCATTTAAACAAG
GAGAAATGTGTGTGCTTTTACAATGTGTAGAGTCTTAGAATGTGGAGTCT
GTTGGAAAAGCCTGCACTTGCATTTGATATATTTGGTAATTTTTGTCCTG
GCCATTTTAATCTTTTTTTTTTTTTTTTTTTTTTGAACTTGTTCTTGACA
GATTTCATGTTCGTAAATGCCATGTTGATGATGATGAAACCATTGGTTCT
TTCCCGAGG

NCCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCAGTCAGTTCACAGGAAACG
GCTCGATCCACTTGCCAAATACTTCCCAAGCATACCAGCAGTCCAGTTCA
GGAGTGTCAGAAGAGCAAACAGATATCAGCAGTGGTGGTACAACCTAGCA
CAGACAGCCAGGCCTCCAACATATCAGCAGGAGTCAACAGCAGTGACCAG
TGAAGATGTGAGACCAATAGAGTATTGCAAAGCAAGCTATGCAAGCCCCT
CTTGTCACTGTCTATTGAGTCCTATTTACTCTACCTCCAAACATCACATG
TCCACCACGTGCTTTGCTTCAGCACGTGAGCCTGTCTTAGCAACCATGAA
TCTGAATCAGCTGACGTCACTCTGCCACAGAATCAGCAAGAAATTGCCAG
AGTGCCACCAGAATTTGTTTGGTTCATTTCCCTCTATGGTGAGAACAAAT
GCAGCTCAGCTATACAAGGTAAGGTGAACAAGCACACATGTGTTGAAGAA
TCCTTCACGTGTCCTTTCACATGCTTGCTTTACAGAACATCCTTTCACCT
GTGCCTGCTTCAGGAAAACACTCCTCCATGTGTTTGCCCCAGCATAGCAC
CACCCAACACAACGGACTTTCCAAAGAACCCATAAGTTTCCACTTCACTA
GAGTCAGACTAAACCATTCATCCAGCTGAAAAACAAGATACTAACT

Query= MSMg01no529_k08.b1 MSMg01no529_k08.b1 CHROMAT_FILE:
MSMg01no529_k08.b1 PHD_FILE: MSMg01no529_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:42 2005
         (645 letters)



>mm_chr7_138712336_138713379
          Length = 1044

 Score = 1172 bits (606), Expect = 0.0
 Identities = 631/642 (98%), Gaps = 6/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaagaataatttactaaattatatttaagatatttaaactgccaaaaaaattct 63
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattcaagaataatttagtaaattatatttaagatatttaaactgccaaaaaa-ttct 262

                                                                       
Query: 64  tccttctccagccattgtttctgtaatatttacacaagtgaatggcctctgggtcacact 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tccttctccagccattgtttctgtaatatttacacaagtgaatggcctctgggtcacact 322

                                                                       
Query: 124 ggaaacccagagtaatatggcctcgcctagcatagcaaatttccttccttttgacatgtt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaaacccagagtaatatggcctcgcctagcatagcaaatttccttccttttgacatgtt 382

                                                                       
Query: 184 caggaggtgtaggtgtaggctctgggttctaaggattgtctgcaagggcccatctccatg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caggaggtgtaggtgtaggctctgggttctaaggattgtctgcaagggcccatctccatg 442

                                                                       
Query: 244 ttttggcagcagcaggacaaagccttttacccagtgacctctcctgggctgagaatgcag 303
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 443 ttttggcagcagcaggacaaagccttttacccagtggcctctcctgggctgagaatgcag 502

                                                                       
Query: 304 aggcttgggcacagattgtaccgtgcagtacctaccccacgtgacttgtcctgttcttac 363
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 503 aggcttgggcacagattgtaccgtgcagtacctaccccatgtgacttgtcctgtccttac 562

                                                                       
Query: 364 tctgttctcaggccttacagggaaatcctgggtgaatagtttctggataaataaagatgt 423
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 563 tctgttctcaggccttacagggaaatcctgggtgaatagtttccggataaataaagatgt 622

                                                                       
Query: 424 atgggacttctgtaattttctgaagtccccttgctaaattggttgggcctctgtaggatc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgggacttctgtaattttctgaagtccccttgctaaattggttgggcctctgtaggatc 682

                                                                       
Query: 484 agagcatttaaacaaggagaaatgtgtgtgcttttacaatgtgtagagtcttagaatgtg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agagcatttaaacaaggagaaatgtgtgtgcttttacaatgtgtagagtcttagaatgtg 742

                                                                       
Query: 544 gagtctgttggaaaagcctgcacttgcatttgatatatttggtaatttttgtcctggcca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagtctgttggaaaagcctgcacttgcatttgatatatttggtaatttttgtcctggcca 802

                                                     
Query: 604 ttttaatcttttttttttttttttttttttgaacttgttctt 645
           |||||||||||||||||||||||||     ||||||||||||
Sbjct: 803 ttttaatcttttttttttttttttt-----gaacttgttctt 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space:   656590
Effective search space used:   656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)