Query= MSMg01no529_n22.b1 MSMg01no529_n22.b1 CHROMAT_FILE:
MSMg01no529_n22.b1 PHD_FILE: MSMg01no529_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:59 2005
(718 letters)
>mm_chr7_76884264_76885383
Length = 1120
Score = 1334 bits (690), Expect = 0.0
Identities = 709/716 (99%), Gaps = 2/716 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgtgtaacatggaaatatcccacacattatttaactagttagaggttttagaa 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattcctgtgtaacatggaaatatcccacacattatttaactggttagaggttttagaa 264
Query: 65 atctaggtaatattgatagacatttttaaagtcttcttaaagatagtatcggtactgttg 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atctaggtaatattgatggacatttttaaagtcttcttaaagatagtatcggtactgttg 324
Query: 125 agatttagaaaatgaaaaaaaaaaa--gaaagttaaaactttggatctaaaattgaagtt 182
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 agatttagaaaaggaaaaaaaaaaaaagaaagttaaaactttggatctaaaattgaagtt 384
Query: 183 gatagcttcctttgaatttcttgttaggtataaatttttaccataggattaatctgtgag 242
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatagcttcctttgaatttcttcttaggtataaatttttaccataggattaatctgtgag 444
Query: 243 ctgtgtcagctacaggttttacatacttagttaattagcaattcttaccaaaccgagtgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgtgtcagctacaggttttacatacttagttaattagcaattcttaccaaaccgagtgt 504
Query: 303 atcatttctctttagaaccctacatggcctcgattagacatatttacgggaaaagtcaat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcatttctctttagaaccctacatggcctcgattagacatatttacgggaaaagtcaat 564
Query: 363 ggatcagacattagaggccaacctcaaagtcaggagagagcgaccatagacctcagagaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggatcagacattagaggccaacctcaaagtcaggagagagcgaccatagacctcagagaa 624
Query: 423 gtgctgcatttgccaagaactggttggttattgatcctggtctgtgtctctggtcacagt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgctgcatttgccaagaactggttggttattgatcctggtctgtgtctctggtcacagt 684
Query: 483 agcacttaccctaatttttctagtgtaaatataagtaaatttgaatgggtgttgctgaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcacttaccctaatttttctagtgtaaatataagtaaatttgaatgggtgttgctgaaa 744
Query: 543 acaatctgtaaatctacattttgtggttttgattgtaattgtagttactggaaggttcaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acaatctgtaaatctacattttgtggttttgattgtaattgtagttactggaaggttcaa 804
Query: 603 tatctggggcatgtcgaggagacaaggctgtggcctggcaccctgttctctgcaaatacc 662
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 805 tatctggggcatgtcgaggagacaaggctgtggcctggcaccctgctctctgcaaatacc 864
Query: 663 tcctgaagcactttcctcggagctattaaggcgactctggctcgctctgctcagaa 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tcctgaagcactttcctcggagctattaaggcgactctggctcgctctgctcagaa 920
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 718
Length of database: 1120
Length adjustment: 10
Effective length of query: 708
Effective length of database: 1110
Effective search space: 785880
Effective search space used: 785880
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no529_n22.g1 MSMg01no529_n22.g1 CHROMAT_FILE:
MSMg01no529_n22.g1 PHD_FILE: MSMg01no529_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:00 2005
(681 letters)
>mm_chr7_76957302_76958382
Length = 1081
Score = 1301 bits (673), Expect = 0.0
Identities = 679/681 (99%)
Strand = Plus / Minus
Query: 1 actgcctaataactttaaatagtccattgagtcttccggaattttttttgttctacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 actgcctaataactttaaatagtccattgagtcttccggaattttttttgttctacttca 822
Query: 61 agaataatctgcttacatcgttaagacctcagctaagctcgccaacacaaattaccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 agaataatctgcttacatcgttaagacctcagctaagctcgccaacacaaattaccagat 762
Query: 121 gttgtatcccctagtttttccatcaaaagaccaaccgccaagcttgttgaaagagaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gttgtatcccctagtttttccatcaaaagaccaaccgccaagcttgttgaaagagaaagg 702
Query: 181 tcattgtccctccctgactataaaactaattttttgcacctcctaacaaacgaaatagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tcattgtccctccctgactataaaactaattttttgcacctcctaacaaacgaaatagga 642
Query: 241 atacctttcagctgtagaaggaacctgtctccctccttccaagttcccctgtttggcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atacctttcagctgtagaaggaacctgtctccctccttccaagttcccctgtttggcttt 582
Query: 301 gttatttttctaataacgcactcatgtgtaagctaataatgtgaacagaggcaaaatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gttatttttctaataacgcactcatgtgtaagctaataatgtgaacagaggcaaaatgaa 522
Query: 361 gagactttaggggaaaaaaagaggaaaaaaggagaaggaattagggcaattgaggtcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gagactttaggggaaaaaaagaggaaaaaaggagaaggaattagggcaattgaggtcgct 462
Query: 421 ctgtttcatttttgctgccaggattttagccctcatttttaccttatcgcttattacaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctgtttcatttttgctgccaggattttagccctcatttttaccttatcgcttattacaca 402
Query: 481 atttacgataaaatgagatgtgattctgttcttattgttcggctatagtctattgagcat 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 401 atttacgataaaatgagatgtgattctgttcttattgtttggctatagtctattgagcat 342
Query: 541 gcatatatagaattcatttcagatttaaacactatcttaattataaactgaacaaaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcatatatagaattcatttcagatttaaacactatcttaattataaactgaacaaaatgg 282
Query: 601 acaacctattgggttctctaaattgcattctaacaaatagtttcattttttatcacattt 660
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 acaacctatcgggttctctaaattgcattctaacaaatagtttcattttttatcacattt 222
Query: 661 ctgctgatgacatattgggta 681
|||||||||||||||||||||
Sbjct: 221 ctgctgatgacatattgggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
