Query= MSMg01no530_g08.b1 MSMg01no530_g08.b1 CHROMAT_FILE:
MSMg01no530_g08.b1 PHD_FILE: MSMg01no530_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:42 2005
(659 letters)
>mm_chr7_121484206_121485264
Length = 1059
Score = 1170 bits (605), Expect = 0.0
Identities = 640/656 (97%), Gaps = 7/656 (1%)
Strand = Plus / Plus
Query: 4 ggaattcctggtttttctctacctgtggaaataaagagtatattttctcccccactgcaa 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctggtttttctttacctgtggaaataaagagtatattttctcccccactgcaa 263
Query: 64 catttttcatttgtctctgggatttcttatccctttttatttattaagcatctctttctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catttttcatttgtctctgggatttcttatccctttttatttattaagcatctctttctt 323
Query: 124 acatctgtttctatacattgagcctttgatctcctttgagttctctgttttatttattga 183
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 acatctgttcctatacattgagcctttgatctcttttgagttctctgttttatttattga 383
Query: 184 agctgttctttttttgatatctgggttattaatgtttatatccagagcattgttaattaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agctgttctttttttgatatctgggttattaatgtttatatccagagcattgttaattaa 443
Query: 244 ttgttctgttggatgagtttctccactgttgacctgagatggctgatttggattgggtat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgttctgttggatgagtttctccactgttgacctgagatggctgatttggattgggtat 503
Query: 304 tggggcctctggggtcatttcttgaacaagaattaccttatctgtcccttgttgatctac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tggggcctctggggtcatttcttgaacaagaattaccttatctgtcccttgttgatctac 563
Query: 364 attcattagtccagtgttggcctttgctacaccttctgcatattccagatagctgtggcc 423
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attcattagtccagtgtcggcctttgctacaccttctgcatattccagatagctgtggcc 623
Query: 424 ttctgtttttggattttctgaagaaaaggcattgttcctaggaatgccttttctacaatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttctgtttttggattttctgaagaaaaggcattgttcctaggaatgccttttctacaatc 683
Query: 484 tcttttaaaacgaccttgcttgccacaatgaaaacatttagtatttaggatttaagcctt 543
|||||||||| |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 684 tcttttaaaatgaccttgcttgccacaatgaaaacatttagcattta-------agcctt 736
Query: 544 taaggattatttttctctattaaagttgccttcttataatttttaaaatctattcttttt 603
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 737 taaggattatttttctctgttaaagttgccttcttataatttttaaaatctagtcttttt 796
Query: 604 atgggatgccatttnaattctttacatttttgtgtgtttctagcatcctctgttat 659
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atgggatgccatttaaattctttacatttttgtgtgtttctagcatcctctgttat 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_g08.g1 MSMg01no530_g08.g1 CHROMAT_FILE:
MSMg01no530_g08.g1 PHD_FILE: MSMg01no530_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:42 2005
(474 letters)
>mm_chr7_121620840_121621719
Length = 880
Score = 833 bits (431), Expect = 0.0
Identities = 465/479 (97%), Gaps = 8/479 (1%)
Strand = Plus / Minus
Query: 1 tgctgatagtgtctttatatgtgtatcttttgatatctgtaatctctgcccaaaagcagt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgctgatagtgtcttgatatgtgtatcttttgatatctgtaatctctgcccaaaagcagt 619
Query: 61 acaaaagagcagcacactcctctgtgtgtgtcttggtggggagggggg-----tcagtag 115
|||||||||||||||||||||||||||||||||||| |||| |||||| |||||||
Sbjct: 618 acaaaagagcagcacactcctctgtgtgtgtcttggggggggggggggggggatcagtag 559
Query: 116 ttccctataaggattcaactgcaaaatgataaccttttacagtctgccctcttgaacaca 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 558 ttccctataaggattcaactgcaaaatgataaccttttacagtctgccctcttgagcaca 499
Query: 176 ggaattatcaatgccagatacaaaccagaaacagaaagactgctaggttttcatttgtag 235
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 498 ggaattatcaatgccagatacaaaccagaaacagaaagactggtaggtttccatttgtag 439
Query: 236 acacaggatagaaagaactgtaggtaacatctaaatattactgaggccatgaatttgaaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acacaggatagaaagaactgtaggtaacatctaaatattactgaggccatgaatttgaaa 379
Query: 296 gaga-atatattgtgaacagatatgcttatcaatg-ttttttatgtcctcaaatttgtat 353
|||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 378 gagaca-atattgtgaacagatatgcttatcaatgtttttttatgtcctcaaatttgtat 320
Query: 354 ctgatttctattttaaaaagactgagctcaaagagaagaaatgaaccaattctggcaact 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctgatttctattttaaaaagactgagctcaaagagaagaaatgaaccaattctggcaact 260
Query: 414 atagcatgttcattgtgctagggcgcaagcatacaaacacaatgtgggggagagggagg 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atagcatgttcattgtgctagggcgcaagcatacaaacacaatgtgggggagagggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 880
Length adjustment: 10
Effective length of query: 464
Effective length of database: 870
Effective search space: 403680
Effective search space used: 403680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
