Query= MSMg01no532_c12.b1 MSMg01no532_c12.b1 CHROMAT_FILE:
MSMg01no532_c12.b1 PHD_FILE: MSMg01no532_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:00 2005
(599 letters)
>mm_chr7_125440660_125441658
Length = 999
Score = 812 bits (420), Expect = 0.0
Identities = 513/544 (94%)
Strand = Plus / Minus
Query: 56 gaaagaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagagagagaga 115
||||||||||||| ||| ||| |||||||||||| ||| ||| ||| ||| ||| ||| |
Sbjct: 918 gaaagaaagaaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 859
Query: 116 gagagagagagagagagagagagagagagagagagagagagagagagagagagagaaagt 175
|| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| |||||
Sbjct: 858 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaagt 799
Query: 176 gtgtgtgttgtcgggagctgggggtttagtttgcagatggcttcctgcatacctgaaggc 235
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 798 gtgtgtgttgtcgggagctgggggcttagtttgcagatggcttcctgcataactgaaggc 739
Query: 236 tggcctctcttggaagagagctgttgcccgaccttccacatatggccactagagggcgcg 295
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 738 cggtctctcttggaagagagctgttgcccgaccttccacatatggccactagaggacgcg 679
Query: 296 ccgtagcagccgaagtcgcgaaggacttggatgctccccaggaagcatcctgggaaaaca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ccgtagcagccgaagtcgcgaaggacttggatgctccccaggaagcatcctgggaaaaca 619
Query: 356 aagcggtcttattttcaaaaggctgaagaggcccctacagagcgcccacacttcgtctcc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagcggtcttattttcaaaaggctgaagaggcccctacagagcgcccacacttcgtctcc 559
Query: 416 tcataagtaaacaaacttaattacaatttaatttattctgagttgtatcaacaattaaaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcataagtaaacaaacttaattacaatttaatttattctgagttgtatcaacaattaaaa 499
Query: 476 agaaattaccctcccgctctattttctttctctttatttaaaataggttcctcctaactt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agaaattaccctcccgctctattttctttctctttatttaaaataggttcctcctaactt 439
Query: 536 gagcgatttaatttggggaaacaattggattttaatgaccttctcctccgagctctgcct 595
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 438 gagcgatttaatgtggggaaacaattggattttaatgaccttctcctcggagctctgcct 379
Query: 596 agta 599
||||
Sbjct: 378 agta 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_c12.g1 MSMg01no532_c12.g1 CHROMAT_FILE:
MSMg01no532_c12.g1 PHD_FILE: MSMg01no532_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:00 2005
(652 letters)
>mm_chr7_125273901_125274952
Length = 1052
Score = 1239 bits (641), Expect = 0.0
Identities = 650/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Plus
Query: 1 cctccttctcctcagtattgagaacaaaaggacccaaacagctgctaccaagcaatgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cctccttctcctcagtattgagaacaaaaggacccaaacagctgctaccaagcaatgagg 259
Query: 61 tgcccatcttggtggtaccaggagcagtcactttgctaagagagggcagagtaataagct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 tgcccatcttggtggtaccaggagcagtcactttgctaagagagggcagagtaataagtt 319
Query: 121 tttccttggcaacttggctactgccccagaaagcttagtttagtcggtgttcccaaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttccttggcaacttggctactgccccagaaagcttagtttagtcggtgttcccaaagta 379
Query: 181 aaatttaagtttaggccagtcccaggtcccaatccagctctcactaaccttccaaatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaatttaagtttaggccagtcccaggtcccaatccagctctcactaaccttccaaatggc 439
Query: 241 tcagaggttacaaacacctctttttctaccacaaagtgaccttt-gaaatgtgtcagaag 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 tcagaggttacaaacacctctttttctaccacaaagtgaccttttgaaatgtgtcagaag 499
Query: 300 atgaagctcgtaacacaaatcttcctcagaactttggcactgcaaatgaagaagatcttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgaagctcgtaacacaaatcttcctcagaactttggcactgcaaatgaagaagatcttt 559
Query: 360 gcaaatactcttcttctttcagagctttcactcacaattaaggctctgcagttttgtttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcaaatactcttcttctttcagagctttcactcacaattaaggctctgcagttttgtttt 619
Query: 420 aaatattgctaaaattaagcttcatgcattttctgtgtaatcctggctgtcctgaaactt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaatattgctaaaattaagcttcatgcattttctgtgtaatcctggctgtcctgaaactt 679
Query: 480 gctttatagaccagattcgcctagaaattccacctatccttgcctcccctgggattgaag 539
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctttataaaccagattcgcctagaaattccacctatccttgcctcccctgggattgaag 739
Query: 540 gtgtcgattcttatctaagaactttcctactgaaataattaactcgctgttcaaaaggga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtgtcgattcttatctaagaactttcctactgaaataattaactcgctgttcaaaaggga 799
Query: 600 gtaaaacattttttaagaaatttttttaatttggagagataatatgaaaaaaa 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtaaaacattttttaagaaatttttttaatttggagagataatatgaaaaaaa 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
