Query= MSMg01no533_a05.b1 MSMg01no533_a05.b1 CHROMAT_FILE:
MSMg01no533_a05.b1 PHD_FILE: MSMg01no533_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:07 2005
(527 letters)
>mm_chr7_77735113_77736038
Length = 926
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgcttttgtctctggcctaattccttaagcagagagggggattttcctctgg 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcactgcttttgtctctggcctaattccttaagcagagagggg-attttcctctgg 263
Query: 65 gagtgttatttcacaaagaaagaaacagcaaataaacaaaagactctcaaagagagagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtgttatttcacaaagaaagaaacagcaaataaacaaaagactctcaaagagagagag 323
Query: 125 agtataaataaaattcatgactccttaaagagtttaccctgaaagaatgtggagggttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtataaataaaattcatgactccttaaagagtttaccctgaaagaatgtggagggttat 383
Query: 185 tgccactaaagcagagcctctaggatagttagtgtgtgcggggatgtatagatatcaaaa 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgccactaaagcggagcctctaggatagttagtgtgtgcggggatgtatagatatcaaaa 443
Query: 245 gagccagcctttatttcatgtgcctcagaagaactgtgcacctgcaaactttcaatgtgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagccagcctttatttcatgtgcctcagaagaactgtgcacctgcaaactttcaatgtgc 503
Query: 305 aaaagaataaccaaaattcattgtcctgactttttttgttaattgaatttttcttggatc 364
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 504 aaaagaatcaccaaaattcattgtcctgactttttttgttaattgaagttttcttggatc 563
Query: 365 tggattttaagacatgcgttcagcatataacgtttttattattattaaaagctgcgggtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggattttaagacatgcgttcagcatataacgtttttattattattaaaagctgcgggtg 623
Query: 425 atgtgtgttatcatttggctaaaacgaatgaccctgaaagaggtcttagaaaaagtttct 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtgtgttatcatttggttaaaacgaatgaccctgaaagaggtcttagaaaaagtttct 683
Query: 485 ctctctctctctctctctctctctctctctctctctctctctc 527
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctctctctctctctctctctctctctctctctctctctctctc 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_a05.g1 MSMg01no533_a05.g1 CHROMAT_FILE:
MSMg01no533_a05.g1 PHD_FILE: MSMg01no533_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:07 2005
(284 letters)
>mm_chr7_77922114_77922797
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Minus
Query: 1 agtgtgatccaaaaccatatttttatgcagaaggtgtaacctagtcactacttgtagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agtgtgatccaaaaccatatttttatgcagaaggtgtaacctagtcactacttgtagact 299
Query: 61 cctgtgtaatcgtttcactgattcatggatacaaacccacctacggggtggcctgctcac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 298 cctgtgtaatcgtttcactgattcatggatacaaacccacctatggggtggcctgctcac 239
Query: 121 ctagcatgtgggagggagggctgaggctctgctcccaaaggaggaaagaagagagggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctagcatgtgggagggagggctgaggctctgctcccaaaggaggaaagaagagagggaag 179
Query: 181 gggaagaaggaagggaggagcaacatgcagaaaggggagaaagagggaaagagggaggaa 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 178 gggaagaaggaagggaggagcaacacgcagaaaggggagaaagagggaaagagggaggaa 119
Query: 241 ggatgtgatggaatgaagggaaagcaagaggaggaggaggagga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggatgtgatggaatgaagggaaagcaagaggaggaggaggagga 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
