Query= MSMg01no533_f11.b1 MSMg01no533_f11.b1 CHROMAT_FILE:
MSMg01no533_f11.b1 PHD_FILE: MSMg01no533_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:31 2005
(667 letters)
>mm_chr7_95681358_95682424
Length = 1067
Score = 1236 bits (639), Expect = 0.0
Identities = 657/663 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtgcttattttacatattctattttactttctgtgtgaacttggcaagcatta 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gaattctgtgcaaattttacatattctattttactttctgtgtgaacttggcaagcatta 948
Query: 65 aacttttctttatcctactttcattaatgttaatgaatgagataagcatacccagatcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 aacttttctttatcctactttcattaatgttaatgaatgagataagcatacccagatcac 888
Query: 125 atgatcattctgaggattaatgcatggaagaacatacagagagagctccaagaacataga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 atgatcattctgaggattaatgcatggaagaacatacagagagagctccaagaacataga 828
Query: 185 cattactaagggagccattctatctgtaaagcaagagttcctctcagttgaaaagttttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 cattactaagggagccattctatctgtaaagcaagagttcctctcagttgaaaagttttc 768
Query: 245 catcttcatcttaatttggaggctcaaaaacccaagattcgattgaatccaactccctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 catcttcatcttaatttggaggctcaaaaacccaagattcgattgaatccaactccctga 708
Query: 305 gttaatcacatttcaataaagatttattctatcagtcccaggctacacgtgtaagacggg 364
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 707 gttaaacacatttcaataaagatttattctatcagtcccaggctacacgtgtaagatggg 648
Query: 365 aaaataaataacttcttgaccttaaaacaccacagtgaagcaattctctcatggatttta 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 647 aaaataaataacttcttgaccttaaaacaccacagtgaagcaattctatcatggatttta 588
Query: 425 gaaaggccaatagccataataactattgcataggagtgtctcagtatgtttttaatgttc 484
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gaaaagccaatagccataataactattgcataggagtgtctcagtatgtttttaatgttc 528
Query: 485 aaagtctcatatctagttcagctcatttggttttagagagaatctactaaaaataacatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaagtctcatatctagttcagctcatttggttttagagagaatctactaaaaataacatg 468
Query: 545 cttttggccaactgatggtgtcctagttagcgttaatattgctgtgatgcagcatttgga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cttttggccaactgatggtgtcctagttagcgttaatattgctgtgatgcagcatttgga 408
Query: 605 gggtaaagagtttactagactttatttacacatgattgtttatccttgagaaaagtaaag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gggtaaagagtttactagactttatttacacatgattgtttatccttgagaaaagtaaag 348
Query: 665 aca 667
|||
Sbjct: 347 aca 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_f11.g1 MSMg01no533_f11.g1 CHROMAT_FILE:
MSMg01no533_f11.g1 PHD_FILE: MSMg01no533_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:32 2005
(666 letters)
>mm_chr7_95537972_95539037
Length = 1066
Score = 1241 bits (642), Expect = 0.0
Identities = 664/680 (97%), Gaps = 14/680 (2%)
Strand = Plus / Plus
Query: 1 tttgatacagccttgataagaattgctgagcataattaggtgtttaaaatttgcatatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttgatacagccttgataagaattgctgagcataattaggtgtttaaaatttgcatatgc 246
Query: 61 tgaaaaatcatgttcaaagattttggaggagctctctagatatataaaaaataacctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgaaaaatcatgttcaaagattttggaggagctctctagatatataaaaaataacctttg 306
Query: 121 tagctcaagaagactatttttgtaagtgtattttattttggaaataaaacagatgtttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tagctcaagaagactatttttgtaagtgtattttattttggaaataaaacagatgtttta 366
Query: 181 ttatcttcaaggaaggaaatgattttgcttaaaatgttatttcctatggtatatcacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttatcttcaaggaaggaaatgattttgcttaaaatgttatttcctatggtatatcacttc 426
Query: 241 atatatagtgtttaaagcaagaaaaaagtcttattaagactccaacaatgttatatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atatatagtgtttaaagcaagaaaaaagtcttattaagactccaacaatgttatatttgg 486
Query: 301 caatgccacactggattaaaagttataatgtgctaagctttctccttaaatgtttttaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 caatgccacactggattaaaagttataatgtgctaagctttctccttaaatgtttttaag 546
Query: 361 aaaatagattatgataaaaattttttcagaatatttgaaagtaaggaaataatcattatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaaatagattatgataaaaattttttcagaatatttgaaagtaaggaaataatcattatg 606
Query: 421 taaacaagtagaataaaatgtttatgtacctaccattattctaagcatatctacatgtct 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 607 taaacaagtagaataaaatgtttatgtacctaccattgttctaagcatatctacatgtct 666
Query: 481 acatatatctatctatctatctatctatctatctatctatctatctatctatctatctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acatatatctatctatctatctatctatctatctatctatctatctatctatctatctat 726
Query: 541 ctat--------------gcattaacaggcagaaataaacattaaataaaatggaataaa 586
|||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 727 ctatctatctatctatatgcattaacaggcagaaataaacattaaataaaatgaaataaa 786
Query: 587 cttcaacagattgtattaaataaccaaatttgtatggatttattttctgtactttctgta 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cttcaacagattgtattaaataaccaaatttgtatggatttattttctgtactttctgta 846
Query: 647 tttgccaacttcttgaagta 666
||||||||||||||||||||
Sbjct: 847 tttgccaacttcttgaagta 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
