NNAAGTCTATAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTCCATTCATGCACTGTTAACAATGTCACCTCTTTTGAGCC
GTTACACATATAGTGAACTAGGTGCACAGTCCCTGAAGATCTCAAATTAG
TTCAGACTCCTCAAGATAGAAATTGAAAGAATACTTGGAGGAAGGCTTGG
CAAATAATGATAAAATGTAAATATTACAACATGGAAACTAGACATTCCCT
GGACCATGTCATTTGCTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTT
GCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCTGG
AACCTGCGGAGCCACACACGTGCACCTTTCTACTGGACCCGAGATTATTT
GGCGGGAATCGGGTCCCCTCTCCCTTCCTTCATATCTGAGTGTCGCAACA
GTAAAATTTGAGCTTTGATCAGAATAACTGTCTTGGCTACATTTCTTTCT
CTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAG
GCTAGAACCCAGGTTGTGGTCTGCTGGCCGGACACAACAATTTGCCAGTT
CCAATTTTCTTTACCCAAAATTTAAAAGTTTTCAATTCATCATAAAGCAA
ATGAAACACTGTAAGATAAACAAAGACTGGACCGTGCTGAAAAAGACAGT
GTGTGGGCTTTAAAAGTGTCAATTAATGCCAACTCTTCATCAAGATCTAT
GGCTCTCTCCTTTTAACTCC

TTATTTCTCTATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGGAGAGAGGTGAGA
GATGAAACCAGACAGAAGAGCAGAGGTGAAAATGGAGAAATGTGAGTTGT
TCTACTGTTAGCTTAAAGATGCAGGCTGGAGCTCTGGAGGTACTGGTTAA
TTCATATTGTTCTTCCTCCTATGGTGCTGCAAACCCCTTCAGCTCCTTGG
GTACTTCCTCTAGTGCCTTTATTGGGGACCCTGTGCTCCATCCAATGGAT
GGCTGTGAGCATCCACTTCTGTATTTGTCAGGTGCTGGCAGAGCCTTGCA
CGAGACAGCTATATCAGGCTCCTGTCAGCAAGCTCTTGTTGGCATCCACA
ATAGTGTCTGGGTTTGGTGGTTGTTTATGGAAAGGATCCCTAGGTGGGGC
AGTCTCTGGATGGTCATTCCTTTGGTCTCTGTTCCACACTTAGTCTCTGT
AACTCCTTCCATGGGTATTTTGTTCTCCCTTCTACGAAGGACTGAAATAT
CCACAATTTGGTCTTCCTTCTTCTCAAGTTTCATGTGGTTTGTGAATTGT
ATCTTGAGTATTCCAAGCTTCTGGGCTAATATCCACTTATCAGTGAGTGC
ATATCATGTGTGTTCTTTGGTGATTCGGTTACCTCACTCAGGATGATATC
CTCCAGATACATCCATTTTCTAAGAATTTCATAAATTCATTGTTTTN

Query= MSMg01no535_c23.b1 MSMg01no535_c23.b1 CHROMAT_FILE:
MSMg01no535_c23.b1 PHD_FILE: MSMg01no535_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:55 2005
         (647 letters)



>mm_chr7_64896820_64897866
          Length = 1047

 Score =  775 bits (401), Expect = 0.0
 Identities = 413/417 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttccattcatgcactgttaacaatgtcacctcttttgagccgttacacatatag 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcttccattcatggactgttaacaatgtcacctcttttgagccgttacacatatag 358

                                                                       
Query: 65  tgaactaggtgcacagtccctgaagatctcaaattagttcagactcctcaagatagaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgaactaggtgcacagtccctgaagatctcaaattagttcagactcctcaagatagaaat 298

                                                                       
Query: 125 tgaaagaatacttggaggaaggcttggcaaataatgataaaatgtaaatattacaacatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgaaagaatacttggaggaaggcttggcaaataatgataaaatgtaaatattacaacatg 238

                                                                       
Query: 185 gaaactagacattccctggaccatgtcatttgctgtagtctcccctcccccagcctgaaa 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 237 gaaactagacattccctggaccatgtcatttgctgtagtctcccctcccccatcctgaaa 178

                                                                       
Query: 245 cctgcttgctcaggggtggagcttcctgctcattcgttctgccacgcccactgctggaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cctgcttgctcaggggtggagcttcctgctcattcgttctgccacgcccactgctggaac 118

                                                                       
Query: 305 ctgcggagccacacacgtgcacctttctactggacccgagattatttggcgggaatcggg 364
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 117 ctgcggagccacacacgtgcacctttctactggacccgagattattcggcgggaatcggg 58

                                                                    
Query: 365 tcccctctcccttccttcatatctgagtgtcgcaacagtaaaatttgagctttgatc 421
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  tcccctcccccttccttcatatctgagtgtcgcaacagtaaaatttgagctttgatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)