Query= MSMg01no535_l19.b1 MSMg01no535_l19.b1 CHROMAT_FILE:
MSMg01no535_l19.b1 PHD_FILE: MSMg01no535_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:38 2005
(633 letters)
>mm_chr7_141222036_141223068
Length = 1033
Score = 1087 bits (562), Expect = 0.0
Identities = 618/650 (95%), Gaps = 22/650 (3%)
Strand = Plus / Plus
Query: 5 gaattctttccatctatgcagccaccatctgcctatgtttaacagagagcctgactgttc 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gaattctttccatctatgcagtcaccatctgcctatgtttaacagagagcctgactgttc 244
Query: 65 atgatgctgtggaagatggtcctgttcatcatggatcttgtaaagtgtctctgggaccca 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 245 atgatgctgtggaagatggtcctgttcatcatgtatcttgtaaagtgtctctgggaccca 304
Query: 125 gggagaaagggatagaatgaaaaagatcatcctaagtggccccaaggcattttgcacctg 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggagaaagg-atagaatgaaaaagatcatcctaagtggccccaaggcattttgcacctg 363
Query: 185 tgtggaagcaccctgtctctccattcaggagatccagcaagcagtgacttcctaggatag 244
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 364 tgtggaagcaccctgtctctccattcaggagatccagcaaacagtgactttctaggatag 423
Query: 245 cctaagctctctatattgcttctcctctgcctcacgtaactttgactttctctctaaaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cctaagctctctatattgcttctcctctgcctcacgtaactttgactttctctctaaaat 483
Query: 305 ctccacagcaaaatgcagaggccatagtgggaaagagatggcagggaaggctgagaatgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctccacagcaaaatgcagaggccatagtgggaaagagatggcagggaaggctgagaatgg 543
Query: 365 gctgtgaatcagaaagaaaggagtccagtgcaatcttcttctttaggtccaagcagaccc 424
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 544 gctgtgaatcagaaagaagggagtccagtggaatcttcttctttaggtccaagcagaccc 603
Query: 425 agtgcctcaccgctcactgcctc---------------------acccctcaaactactc 463
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 604 agtgcctcaccgctcactgcctctgagcaggagagatgaggccgacccctcaaactactc 663
Query: 464 agagcagtctcgctcacaagtgtggggaactgggaggaaggaggcccagccaggggaggc 523
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agagcagtctcgctcagaagtgtggggaactgggaggaaggaggcccagccaggggaggc 723
Query: 524 aaggccacctcaggggtgtagtcctacaagaatggaacaaaacaatagcctcccagtgat 583
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aagaccacctcaggggcgtagtcctacaagaatggaacaaaacaatagcctcccagtgat 783
Query: 584 ccacagccaaggcaaacagaaaagagcacacacggaaggaggtggacttg 633
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 784 ccacagccaaggcaaacagaaaagagcacacacagaaggaggtggacttg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_l19.g1 MSMg01no535_l19.g1 CHROMAT_FILE:
MSMg01no535_l19.g1 PHD_FILE: MSMg01no535_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:38 2005
(484 letters)
>mm_chr7_141399282_141400165
Length = 884
Score = 818 bits (423), Expect = 0.0
Identities = 432/435 (99%)
Strand = Plus / Minus
Query: 50 ggtccttcaatgtgggtgtcacgtttaacatttgcatgtgtttcagtggcaagtcctctt 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 ggtccttcaatgtgggtgtcacgtttaacatttgcatgtgtttcagtggcaagtcctctt 825
Query: 110 cggggtcaccatgttttccgagccagcaggccgcatatgaatcaacacgtttccttcctg 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 cggggtcaccatgttttccgagccagcaggccgcatatgaatcaacacgtttccttcctg 765
Query: 170 cacactgtgatccaagagttgggctaggagctgggggataccatggtgtgaaaaccagac 229
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 764 cacactgtgatccaagagttgggctaggagctgggggttaccatggtgtgaaaaccagac 705
Query: 230 gcaggctctcacctcggagcatgtagagcatgcgaatcctagggatgtgctgaaagaaat 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gcaggctctcacctcggagcatgtagagcatgcgaatcctagggatgtgctgaaagaaac 645
Query: 290 tgaacccgctccagggggaccgggtctcagcttccagtcctgagaatattcatcaggaaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgaacccgctccagggggaccgggtctcagcttccagtcctgagaatattcatcaggaaa 585
Query: 350 tcaggcagctgctctcccgttggcaggtcattctttgccttggcagctgcaggggtggat 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tcaggcagctgctctcccgttggcaggtcattctttgccttggcagctgcaggggtggat 525
Query: 410 gtgcaaatgatggggccaagctaagctgtgggcgaggacatcagctgttcccatcctctc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gtgcaaatgatggggccaagctaagctgtgggcgaggacatcagctgttcccatcctctc 465
Query: 470 ctggcgggggcaaac 484
||||| |||||||||
Sbjct: 464 ctggcaggggcaaac 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
