Query= MSMg01no537_h13.b1 MSMg01no537_h13.b1 CHROMAT_FILE:
MSMg01no537_h13.b1 PHD_FILE: MSMg01no537_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:51 2005
(619 letters)
>mm_chr7_62518716_62519734
Length = 1019
Score = 1091 bits (564), Expect = 0.0
Identities = 602/616 (97%), Gaps = 6/616 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgaat-tgtttgcaggagctagggaaggtcattgaatctccaggagcagaag 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgtgaacatgtttgcaggagctagggaaggtcattgaatctccaggagcagaag 263
Query: 64 tcatatgtgaatgtcagttcatgtgggtgcttgaaattaatctctggtccccttaaagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcatatgtgaatgtcagttcatgtgggtgcttgaaattaatctctggtccccttaaagag 323
Query: 124 tggcaagcacttttaattgctgaagagtctctccaggcctctgccatagggtattgatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggcaagcacttttaattgctgaagagtctctccaggcctctgccatagggtattgatgt 383
Query: 184 ccctgaagacacattcaccattgatgactgatttaaatcttagggttccagtacatcaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccctgaagacacattcaccattgatgactgatttaaatcttagggttccagtacatcaca 443
Query: 244 gatataatatttctttaatcttttccttcttttgaatatttccccatagaattgagccta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatataatatttctttaatcttttccttcttttgaatatttccccatagaattgagccta 503
Query: 304 ttcttagccactaatagaaagaagccatcctctgagatgcaaatgactcagcccttgctc 363
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcttagccactgatagaaagaagccatcctctgagatgcaaatgactcagcccttgctc 563
Query: 364 ctgggaacccattcaattgagatgagtttgcccttaggtttctgttgttgttgttgttgt 423
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 564 ctgggaacccattcaattgagaggattttgcccttaggtttctgttgttgttgttgtt-t 622
Query: 424 ttcaattttttttattagatatttcctttattttcatttaaaatgttattccctttcctg 483
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 t--aatttttt--attagatatttcctttattttcatttaaaatgttattccctttcctg 678
Query: 484 gttttccctccaaaaacccctatcccattccctgcctccctgcttctatgagaatgttcc 543
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 679 gttttccctccaaaaacccctatcccattccctgcctccctgcttctatgagggtgttcc 738
Query: 544 cccacccattcccctacactcactggggcattgagctttcataggatgaagggcctctcc 603
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cccacccattcccctacactgactggggcattgagctttcataggatgaagggcctctcc 798
Query: 604 tcccattgatgtctga 619
|||| |||||||||||
Sbjct: 799 tccccttgatgtctga 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_h13.g1 MSMg01no537_h13.g1 CHROMAT_FILE:
MSMg01no537_h13.g1 PHD_FILE: MSMg01no537_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:51 2005
(654 letters)
>mm_chr7_62679046_62680099
Length = 1054
Score = 1178 bits (609), Expect = 0.0
Identities = 645/659 (97%), Gaps = 6/659 (0%)
Strand = Plus / Minus
Query: 1 tggccttac----aaaaaaaaaagcatgaaataatcctgatcagaaattcagaagacagg 56
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tggccttacaaaaaaaaaaaaaagcatgaaataatcctgatcagaaattcagaagacagg 808
Query: 57 tcttatcaccaaataaagaaagttgaaaaattgctccagagaaacttaagtagacagaag 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tcttatcaccaaataaagaaagttgaaaaattgctccagagaaacttaagtagacagaag 748
Query: 117 aactagagagacagagcagacagaacatagcgaggcttcttattaggaatcctggagctt 176
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 747 aactagagagacagagcagacagaacatagcgaggcttcttataaggaatcctggagctt 688
Query: 177 agaaaaaaagttgatgggggtcaagtgcggcttgtggccagataccatccatcaatcact 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agaaaaaaagttgatgggggtcaagtgcggcttgtggccagataccatccatcaatcact 628
Query: 237 gatttgctgagtgtgcacacggtgttgtgcgtaacatgttaccagaggtagctgcagatg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatttgctgagtgtgcacacggtgttgtgcgtaacatgttaccagaggtagctgcagatg 568
Query: 297 ggaactcttctgtggtgcactgtgaagctgaaatcttgtctttctccatccattatagcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggaactcttctgtggtgcactgtgaagctgaaatcttgtctttctccatccattatagcc 508
Query: 357 cagaaccacttgtatagtattcccagttcctcctctgattagagatcttggtaatgatgt 416
| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 507 ctgaaccgcttgtatagtattcccagttcctcctctgattggagatcttgggaatgatgt 448
Query: 417 cactacaataaagaggtggcaatgttgagttgaagggagatggaattttggaagaaagag 476
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 447 cactacaataaagaggtggcaacgttgagttgaagggagatggaattttggaagaaagag 388
Query: 477 atgaattttgaatgctgatttttctccctgctagctctagctatgttc-ttttttctaaa 535
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 387 atgaattttgaatgctga-ttttctccctgctagctctagctatgttctttttttctaaa 329
Query: 536 ctgaagacagcacaactatcatgaaccctatattcctaactctaaccctgcaaatatcag 595
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctgaagacagcacaattatcatgaaccctatattcctaactctaaccctgcaaatatcag 269
Query: 596 ataatacagtattaagtacaaatatattaagtatgtaatactgactatagctgccattt 654
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 268 ataatacagtattaagtacaaatatattaagtatgtaatactgactgtagctgccattt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
