Query= MSMg01no537_h24.b1 MSMg01no537_h24.b1 CHROMAT_FILE:
MSMg01no537_h24.b1 PHD_FILE: MSMg01no537_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:53 2005
(467 letters)
>mm_chr7_3131696_3132562
Length = 867
Score = 880 bits (455), Expect = 0.0
Identities = 465/469 (99%), Gaps = 2/469 (0%)
Strand = Plus / Plus
Query: 1 ggggtgggcagaatgatctatttgccatatttgtcccagaaccatttcagggtcctccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggggtgggcagaatgatctatttgccatatttgtcccagaaccatttcagggtcctccgt 260
Query: 61 aactacatagcaaggtgaaggccagcctgaaatacaggagaccctgtcttcagaataata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactacatagcaaggtgaaggccagcctgaaatacaggagaccctgtcttcagaataata 320
Query: 121 gaattacaaaatgtatcatgttactgatctcaacaatctagcttacattaactcatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaattacaaaatgtatcatgttactgatctcaacaatctagcttacattaactcatgaag 380
Query: 181 agcagtttaactatcatttttgtttgattggttggttgattgctttgcttttttgttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagtttaactatcatttttgtttgattggttggttgattgctttgcttttttgttttt 440
Query: 241 aagaaatggtttctctgtagagccctggctgtcctggaactcactctgtagaccaggctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaatggtttctctgtagagccctggctgtcctggaactcactctgtagaccaggctg 500
Query: 301 gcctcaaactcaaagagatctgcctgcctctgcctcctgagtgctgggattaaaggggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctcaaactcaaagagatctgcctgcctctgcctcctgagtgctgggattaaaggggta 560
Query: 361 tgtcaccaccaccctacttaaccatccaatttttaaaaggcttaggaacaaacctgtctt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtcaccaccaccctacttaaccatccaatttttaaaaggcttaggaacaaacctgtctt 620
Query: 421 tgcatttgggatttttttttt--cagatttggaggcagttggatagatt 467
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tgcatttgggattttttttttttcagatttggaggcagttggatagatt 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_h24.g1 MSMg01no537_h24.g1 CHROMAT_FILE:
MSMg01no537_h24.g1 PHD_FILE: MSMg01no537_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:53 2005
(625 letters)
>mm_chr7_3310605_3311628
Length = 1024
Score = 1178 bits (609), Expect = 0.0
Identities = 621/625 (99%), Gaps = 1/625 (0%)
Strand = Plus / Minus
Query: 1 caaggttcaatccccagtacgagggggcgggagacttagcatgtctaaaactcagcattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 caaggttcaatccccagtacgagggggcgggagacttagcatgtctaaaactcagcattt 924
Query: 61 ggaaagtagaggcaggcaggcaggccaaagttcgaaaccagtctctgctacatatctagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ggaaagtagaggcaggcaggcaggccaaagttcgaaaccagtctctgctacatatctagt 864
Query: 121 ttgagaacatctggactatacgagagcatatctgaaagattaaggctgaaaggcaggtct 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ttgagaacacctggactatacgagagcatatctgaaagattaaggctgaaaggcaggtct 804
Query: 181 tctgccagaaagggaatgaatggatggagcccagaccatccatccagagtggggatggag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 803 tctgccagaaagggaatgaatggatggagcccagaccatccatcc-gagtggggatggag 745
Query: 241 tgagggatgtaggctgtggtctgtaggaggtatgcatcctggttcctggtatggaacacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgagggatgtaggctgtggtctgtaggaggtatgcatcctggttcctggtatggaacacc 685
Query: 301 ctggataagttcagtcaacctcagttccaggttggggcgtggctagtgaggaggcacagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctggataagttcagtcaacctcagttccaggttggggcgtggctagtgaggaggcacagc 625
Query: 361 ctcaccagtaatatggatctcatccgacgtaggagcccggatttccagttgcagacgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcaccagtaatatggatctcatccgacgtaggagcccggatttccagttgcagacgtcc 565
Query: 421 acggcgctctgtgtggtccacaccgcaaagggagggcacgctgcgcacacagcgccggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acggcgctctgtgtggtccacaccgcaaagggagggcacgctgcgcacacagcgccggtg 505
Query: 481 cacattcatctcgcaacctggtggaacaaaactggggataacatttcaggcccaggcctt 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 cacattcatctcgcaacctggtggaacaaaactggggatagcatttcaggcccaggcctt 445
Query: 541 caccaaccccaccttagatctcccctaaacctcagacattgcactgtggctgaaggagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caccaaccccaccttagatctcccctaaacctcagacattgcactgtggctgaaggagag 385
Query: 601 caccctctagcgcctgatctgggca 625
|||||||||||||||||||||||||
Sbjct: 384 caccctctagcgcctgatctgggca 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
