Query= MSMg01no537_l08.b1 MSMg01no537_l08.b1 CHROMAT_FILE:
MSMg01no537_l08.b1 PHD_FILE: MSMg01no537_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:09 2005
(633 letters)
>mm_chr7_99971604_99972635
Length = 1032
Score = 1208 bits (625), Expect = 0.0
Identities = 628/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcaaagctttactattatttattatttagcttcttaccttcactttttcacca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gaattcatcaaagctttactattatttattatttagcttcttaccttcactttttcacca 773
Query: 65 ttaatctccactgtcttaatcataaaatcaactccaattgtggctccttgacctgggggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttaatctccactgtcttaatcataaaatcaactccaattgtggctccttgacctgggggg 713
Query: 125 aaaagaccctaaggaagaaataatggcaagtaacatttaagcacatcttccaagtaggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aaaagaccctaaggaagaaataatggcaagtaacatttaagcacatcttccaagtaggtg 653
Query: 185 aactctcctcacttcccgcccatcctttgactgaggtaattgttagaacaaggactcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aactctcctcacttcccgcccatcctttgactgaggtaattgttagaacaaggactcaca 593
Query: 245 ctgtttcttgtcacgtttgaaggggaacagagagcagggagggagctggagagaaatgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctgtttcttgtcacgtttgaaggggaacagagagcagggagggagctggagagaaatgct 533
Query: 305 gacagaagcaaacatgaagctgactgtaaaggaaagagtctggaagggccagtgggccgt 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 532 gacagaagcaaacatgaagctgactgtaaaggaaag-gtctggaagggccagtgggccgt 474
Query: 365 gctgcctttaaaacagaaaacccggacaaaagagtgaagaggaatgagtcactagaatga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gctgcctttaaaacagaaaacccggacaaaagagtgaagaggaatgagtcactagaatga 414
Query: 425 catcaggattgtcaggatgggaaaagaaaaggtaagactggttaaaaacagacaggaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 catcaggattgtcaggatgggaaaagaaaaggtaagactggttaaaaacagacaggaaaa 354
Query: 485 tgaggtgtggaggacctctgctatggaatgagaagaagagaaagacacacagctgggttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgaggtgtggaggacctctgctatggaatgagaagaagagaaagacacacagctgggttt 294
Query: 545 tcctgggccctcaggatggtcactagcctgaggtactgtaccatacatacaaagacagac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcctgggccctcaggatggtcactagcctgaggtactgtaccatacatacaaagacagac 234
Query: 605 agacacattacacgcagtccagatggaca 633
|||||||||||||||||||||||||||||
Sbjct: 233 agacacattacacgcagtccagatggaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_l08.g1 MSMg01no537_l08.g1 CHROMAT_FILE:
MSMg01no537_l08.g1 PHD_FILE: MSMg01no537_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:09 2005
(659 letters)
>mm_chr7_99788753_99789811
Length = 1059
Score = 849 bits (439), Expect = 0.0
Identities = 452/457 (98%)
Strand = Plus / Plus
Query: 203 cctcccacaggtcagttctaggcatgactctagagggagggggctagctcagggcaagtt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 403 cctcccacaggtcagttctaggcatgactctagagggagggggctagctcagggcaaatt 462
Query: 263 aagttttgacacccgtttctattcctctatcctcatgtgctccataaacttgtttacttt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aagttttgacacccgtttctattcctctatcctcatgtgctccataaacttgtttacttt 522
Query: 323 caaaaataagaggctcactgttttgcccaactcctgggctcaagtaatttcctatctcaa 382
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 523 caaaaataagaggctcactgttttgcccaactcctgggctcaagtgatttcctatctcaa 582
Query: 383 tagctaggaccatgccattacacccttttctgcccatgcactcctcanagacaatgcctc 442
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 583 tagctaggaccatgccattacacccttttctgcccatgcactcctcaaagacaatgcctc 642
Query: 443 ttcatattatgccatttattaagatgtcctttgccttgacatgggtaatttttggttctt 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttcatattatgccatttattaagatgtcctttgccttgacatgggtaatttttggttctt 702
Query: 503 ggtttactcctttgctaaagaacatattacctcaagaaattgacactgttttgaatgaca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggtttactcctttgctaaagaacatattacctcaagaaattgacactgttttgaatgaca 762
Query: 563 ganagctagcatcatatgaattgaaggcatctgtttttaacattatgtgaatggaggaga 622
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gaaaactagcatcatatgaattgaaggcatctgtttttaacattatgtgaatggaggaga 822
Query: 623 gaatcatacatgtagtgctcatgtcgaagtcagagaa 659
|||||||||||||||||||||||||||||||||||||
Sbjct: 823 gaatcatacatgtagtgctcatgtcgaagtcagagaa 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
