Query= MSMg01no537_n06.b1 MSMg01no537_n06.b1 CHROMAT_FILE:
MSMg01no537_n06.b1 PHD_FILE: MSMg01no537_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:18 2005
(596 letters)
>mm_chr7_125195743_125196738
Length = 996
Score = 1052 bits (544), Expect = 0.0
Identities = 580/592 (97%)
Strand = Plus / Plus
Query: 5 gaattctccctctctcctgaatgattctcactgcaacaccacaatcgaatattttagctc 64
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccccctcactcctgaatgattctcactgcaacaccacaatcgaatattttagctc 264
Query: 65 tttaagggcacagttgttttgttttttaagtttctcaaagctttgatattggatttggtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaagggcacagttgttttgttttttaagtttctcaaagctttgatattggatttggtc 324
Query: 125 atgtcagagactcttatcaccctgtggggccgcagctctggaagagaaggagagcaaaga 184
||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 atgccagagaatcttatcaccctgtggggccacagctctggaagagaaggagagcaaaga 384
Query: 185 tgagaggatgctgaaccaacaggtaacacttgtcctctctgcatataaaaggagatttgg 244
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 tgagaggatgctgagccaacaggtaacacttgtcctctctgcatataacaggagatttgg 444
Query: 245 actccacgccagccttggataaatgcagttattgccggtttaccatgagaccaatggact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actccacgccagccttggataaatgcagttattgccggtttaccatgagaccaatggact 504
Query: 305 gagtgtgatgcctggctttgccctgccctttgagatgaggtcacagacaagacaggataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagtgtgatgcctggctttgccctgccctttgagatgaggtcacagacaagacaggataa 564
Query: 365 gggtctgtcctggatggtgagttgggctgtattggaaaaagaacaaactgcagggatggc 424
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 gggtctgtcctggatggtaagttgggctgtattggaaagagaacaaactgcagggatggc 624
Query: 425 tgcagatgctcaggtctgttctgaagcttggtgtggctaggtgtccagtcaggggcttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcagatgctcaggtctgttctgaagcttggtgtggctaggtgtccagtcaggggcttgg 684
Query: 485 aaaggcttggtttcctatccctccaagtcatctttcacccttcaaaaacgtactgagggt 544
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 685 aaaggcttggtttcctatccctctaagtcatctttcacccttcaaaaatgtactgagggt 744
Query: 545 tggtgctatatggtggggcaaaaaatgagcaggatctcttaagcttttgttc 596
|||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tggtgctatatgatggggcaaaaaatgagcaggatctcttaagcttttgttc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_n06.g1 MSMg01no537_n06.g1 CHROMAT_FILE:
MSMg01no537_n06.g1 PHD_FILE: MSMg01no537_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:18 2005
(580 letters)
>mm_chr7_125349858_125350834
Length = 977
Score = 1060 bits (548), Expect = 0.0
Identities = 572/580 (98%), Gaps = 3/580 (0%)
Strand = Plus / Minus
Query: 1 tttaatacatgggagacagtcttttgtaagatgtgtcatactttcatccttgaaaattga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 777 tttaatacatgggagacagtcttttgtaagatgtatcatactttcatccttgaaaattga 718
Query: 61 tgccttttgtatgttttttgttccatttgcattaaaacaaacacagtagtaagttgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgccttttgtatgttttttgttccatttgcattaaaacaaacacagtagtaagttgcttc 658
Query: 121 aggagttgaggcaagagggagcttgctgtctgggccttctctgtgcttctctgagctacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aggagttgaggcaagagggagcttgctgtctgggccttctctgtgcttctctgagctacg 598
Query: 181 aggctgagaagatcttcaagtggattttcagcaagtttagctcatctgcgaaagatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aggctgagaagatcttcaagtggattttcagcaagtttagctcatctgcgaaagatgagg 538
Query: 241 tgaagctcctctacttgtgtgccacttacagagcgctggagactgtgggggagaagaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgaagctcctctacttgtgtgccacttacagagcgctggagactgtgggggagaagaaag 478
Query: 301 ccttttcttcggtgatgcaggtgagagccaggggacccacaatgcacgtgcagtggaggt 360
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 477 ccttttcttcggtgatgcaggtgagagcca-gggacccacaatgca-gtgcagt-gaggt 421
Query: 361 aaaggacaggcctagctgcctactgttgagggcagcactgtgaaaatgaatgccttttaa 420
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaagggcaggcctagctgcctcctgttgagggcagcactgtgaaaatgaatgccttttaa 361
Query: 421 gtccaagtaaagttagggttaaagtaactgaattttagacatttatgtctttttagtttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtccaagtaaagttagggttaaagtaactgaattttagacatttatgtctttttagtttt 301
Query: 481 tagaagctttcctttgaagttgcttaatactagagtgacttgcagatttgaaagtaggaa 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tagaagcttccctttgaagttgcttaatactagagtgacttgcagatttgaaagtaggaa 241
Query: 541 ctctactgtgagagttcagtcagaggccgtcagcgtttga 580
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 ctctactgtgagagttcagtcagaggccgtcagcatttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 977
Length adjustment: 10
Effective length of query: 570
Effective length of database: 967
Effective search space: 551190
Effective search space used: 551190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
