Query= MSMg01no537_n08.b1 MSMg01no537_n08.b1 CHROMAT_FILE:
MSMg01no537_n08.b1 PHD_FILE: MSMg01no537_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:18 2005
(609 letters)
>mm_chr7_125195743_125196751
Length = 1009
Score = 1077 bits (557), Expect = 0.0
Identities = 593/605 (98%)
Strand = Plus / Plus
Query: 5 gaattctccctctctcctgaatgattctcactgcaacaccacaatcgaatattttagctc 64
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccccctcactcctgaatgattctcactgcaacaccacaatcgaatattttagctc 264
Query: 65 tttaagggcacagttgttttgttttttaagtttctcaaagctttgatattggatttggtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaagggcacagttgttttgttttttaagtttctcaaagctttgatattggatttggtc 324
Query: 125 atgtcagagactcttatcaccctgtggggccgcagctctggaagagaaggagagcaaaga 184
||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 atgccagagaatcttatcaccctgtggggccacagctctggaagagaaggagagcaaaga 384
Query: 185 tgagaggatgctgaaccaacaggtaacacttgtcctctctgcatataaaaggagatttgg 244
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 tgagaggatgctgagccaacaggtaacacttgtcctctctgcatataacaggagatttgg 444
Query: 245 actccacgccagccttggataaatgcagttattgccggtttaccatgagaccaatggact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actccacgccagccttggataaatgcagttattgccggtttaccatgagaccaatggact 504
Query: 305 gagtgtgatgcctggctttgccctgccctttgagatgaggtcacagacaagacaggataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagtgtgatgcctggctttgccctgccctttgagatgaggtcacagacaagacaggataa 564
Query: 365 gggtctgtcctggatggtgagttgggctgtattggaaaaagaacaaactgcagggatggc 424
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 gggtctgtcctggatggtaagttgggctgtattggaaagagaacaaactgcagggatggc 624
Query: 425 tgcagatgctcaggtctgttctgaagcttggtgtggctaggtgtccagtcaggggcttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcagatgctcaggtctgttctgaagcttggtgtggctaggtgtccagtcaggggcttgg 684
Query: 485 aaaggcttggtttcctatccctccaagtcatctttcacccttcaaaaacgtactgagggt 544
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 685 aaaggcttggtttcctatccctctaagtcatctttcacccttcaaaaatgtactgagggt 744
Query: 545 tggtgctatatggtggggcaaaaaatgagcaggatctcttaagcttttgttcacaaacaa 604
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tggtgctatatgatggggcaaaaaatgagcaggatctcttaagcttttgttcacaaacaa 804
Query: 605 gcaaa 609
|||||
Sbjct: 805 gcaaa 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_n08.g1 MSMg01no537_n08.g1 CHROMAT_FILE:
MSMg01no537_n08.g1 PHD_FILE: MSMg01no537_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:19 2005
(629 letters)
>mm_chr7_125349806_125350834
Length = 1029
Score = 1166 bits (603), Expect = 0.0
Identities = 622/629 (98%), Gaps = 2/629 (0%)
Strand = Plus / Minus
Query: 1 tttaatacatgggagacagtcttttgtaagatgtgtcatactttcatccttgaaaattga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 829 tttaatacatgggagacagtcttttgtaagatgtatcatactttcatccttgaaaattga 770
Query: 61 tgccttttgtatgttttttgttccatttgcattaaaacaaacacagtagtaagttgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tgccttttgtatgttttttgttccatttgcattaaaacaaacacagtagtaagttgcttc 710
Query: 121 aggagttgaggcaagagggagcttgctgtctgggccttctctgtgcttctctgagctacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aggagttgaggcaagagggagcttgctgtctgggccttctctgtgcttctctgagctacg 650
Query: 181 aggctgagaagatcttcaagtggattttcagcaagtttagctcatctgcgaaagatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aggctgagaagatcttcaagtggattttcagcaagtttagctcatctgcgaaagatgagg 590
Query: 241 tgaagctcctctacttgtgtgccacttacagagcgctggagactgtgggggagaagaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgaagctcctctacttgtgtgccacttacagagcgctggagactgtgggggagaagaaag 530
Query: 301 ccttttcttcggtgatgcaggtgagagccagggacccacaatgcagtgcagtgaggtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ccttttcttcggtgatgcaggtgagagccagggacccacaatgcagtgcagtgaggtaaa 470
Query: 361 ggacaggcctagctgcctactgttgagggcagcactgtgaaaatgaatgccttttaagtc 420
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gggcaggcctagctgcctcctgttgagggcagcactgtgaaaatgaatgccttttaagtc 410
Query: 421 caagtaaagttagggttaaagtaactgaattttagacatttatgtctttttagtttttag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caagtaaagttagggttaaagtaactgaattttagacatttatgtctttttagtttttag 350
Query: 481 aagctttcctttgaagttgcttaatactagagtgacttgcagatttgaaagtaggaactc 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aagcttccctttgaagttgcttaatactagagtgacttgcagatttgaaagtaggaactc 290
Query: 541 tactgtgagagttcagtcagaggccgtcagcgtttgagagagactaacgctaaacatcac 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 289 tactgtgagagttcagtcagaggccgtcagcatttgagagagactaacgctaaacatcac 230
Query: 601 agctaatttctaaatctttttcccccccc 629
||||||||||||||||||| ||||||||
Sbjct: 229 agctaatttctaaatcttt--cccccccc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
