NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAATCTCTCTTCCAGAACTCCCACTTTCTACTTACTGCCTT
TTGCTAATATGCCTTCATCTTTTTATTGATAACTAATGCTTCCACAGAGT
ACACAAGAAATTATCCCTACATCTCCCACTTTTACTCCAATAAAAAATTC
TTCCTCTAATATCAATAAACTATATTTTATATGTAGATATAATCATAATA
TATTATATAATGTAATATATACATAAATACATATGTAACATATGCATATA
AAATAAAATATACATGTATATTCTTATACATGTATAAGAACAATTATGAA
AACTATCAGATAAGAATTACATTCACAATGTACAGCCCATATGTATTTAG
CAACCTTGGAGACATTATTCTACTATCTACCTATTTTGATGTTAAAACTT
TTGTACCTAAATCATTTTTAATCATAATTTTCAGTACCAACCTAAACTTG
TTTTCGACTTTAAATCCTAAACAGCTTAAACTTAATTGTGATACTATAAC
TACCTAATCTTCAACCCCATTAGAGACCTGAGAAGGTACATATAATCTGA
AAAATAGAAAGAGTAGAGCAAGCGGGTATACTATAAAAATGATAGTCTAC
CATGGGAGCTATTAACACAGGTCTGACNATTGGTATTTTAACAAAGGTGA
AAAGTTNGCATACATTTTCATATTTGAAACAGACAGTNGAAGAAAGAGAT
GGCATACATTTAGCCTN

NNNCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGGATAGACATTTCTAAA
AGATCATAAATTATCAGGAGGCAAGAATGGTCCATTCTGGCTATGATTGA
TAAACTACATTAGGAAGTAATGTGAGACAGCCAATGAAAGAAGCTGTAAA
TTGACTCAGATGTAGATCATATCCCGTAGTGAGGAAATAAGAATAGGCTC
AGAGCAGTGTGAAGGATGAAGGATGAAAGGAGTAATGAGGCAGAATAGAG
AGAGTGGACCCTTTCAAGAGGGTGTATTACCTCAAATCACCATATCTCTG
AAATTGCAGTTAAGAATTCTATCAATCCAGGCCAGAGTTGACACCTAATT
GCTTTTACCTGGAAACACTGGGCAGGGTGATAATGATCCCATTATCACAG
ATCAAGAAGGAACACAAAGAGACATCCTGACTTGTACAATACTAGATGTA
AAAATTTGTAAATATCTTTTGAAGAATAAATAAACAAGGGATGAAACCTA
TGCTTTTTTGTGGTTAAAGAATAGGATGAATGGTTTTTGGAAAGTGGACG
GATTAGGGTTGTTATAAGTGATGTTTGTCTTATCTATCATGTTTATGTTT
ATATCTGTGGTTAAAGATAGGACAAATGGTTTTTGGAAAGTGAACNGGAT
ATGGNNTGTATAAAAGAANGTTGGTTTATCTATCCTGTTTATGTTTAA

Query= MSMg01no537_p02.g1 MSMg01no537_p02.g1 CHROMAT_FILE:
MSMg01no537_p02.g1 PHD_FILE: MSMg01no537_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:27 2005
         (523 letters)



>mm_chr7_84624978_84625900
          Length = 923

 Score =  988 bits (511), Expect = 0.0
 Identities = 520/523 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaggatagacatttctaaaagatcataaattatcaggaggcaagaatggtccattctgg 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agaggatagacctttctaaaagatcataaattatcaggaggcaagaatggtccattctgg 664

                                                                       
Query: 61  ctatgattgataaactacattaggaagtaatgtgagacagccaatgaaagaagctgtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ctatgattgataaactacattaggaagtaatgtgagacagccaatgaaagaagctgtaaa 604

                                                                       
Query: 121 ttgactcagatgtagatcatatcccgtagtgaggaaataagaataggctcagagcagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttgactcagatgtagatcatatcccgtagtgaggaaataagaataggctcagagcagtgt 544

                                                                       
Query: 181 gaaggatgaaggatgaaaggagtaatgaggcagaatagagagagtggaccctttcaagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gaaggatgaaggatgaaaggagtaatgaggcagaatagagagagtggaccctttcaagag 484

                                                                       
Query: 241 ggtgtattacctcaaatcaccatatctctgaaattgcagttaagaattctatcaatccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggtgtattacctcaaatcaccatatctctgaaattgcagttaagaattctatcaatccag 424

                                                                       
Query: 301 gccagagttgacacctaattgcttttacctggaaacactgggcagggtgataatgatccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gccagagttgacacctaattgcttttacctggaaacactgggcagggtgataatgatccc 364

                                                                       
Query: 361 attatcacagatcaagaaggaacacaaagagacatcctgacttgtacaatactagatgta 420
           |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 363 attatcacagatcaagaaggaacaaaaagagacgtcctgacttgtacaatactagatgta 304

                                                                       
Query: 421 aaaatttgtaaatatcttttgaagaataaataaacaagggatgaaacctatgcttttttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaatttgtaaatatcttttgaagaataaataaacaagggatgaaacctatgcttttttg 244

                                                      
Query: 481 tggttaaagaataggatgaatggtttttggaaagtggacggat 523
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tggttaaagaataggatgaatggtttttggaaagtggacggat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)