XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTATG
TTTACCAGGCTGGCCTTGAACTCACAGATATTTGTCCTCCTCCCACACCC
ACAACAATTTTGAAACAGTAACAAACTTGAAAAAGTTTTAAGTATGATAC
ATAATTATTGTTATTTTATTTTTCGGACATTTTAAGAGGAAGCTACTGCC
CTTATGCTCCTTCACTCAGAATGGTTTATCGTGAATTTTATACAAACAGG
AACATTGGTCTACACAATGGCAGTGCAGTTGTCAAAATAGGAAATTCAGG
ACTGGAGAGATGGCCCAGAGGTCAAGAGCCCTGGCTGCTCTTCAGAGGTC
CTGAGTTCAATTCCCAGCAACCACATAGTGGCTCACAACCATCTGTAAAG
GGATCTGATACCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGCACTCA
CATACATAAAATAGATAAATAATTCTTTACAAAATAGAAAATTCATGCTG
ACCCAGTATTTTACTTAATTTGGGTTTTGTTGATTATGCTATTAATTTCA
TAATTGGTGAAAGTAGTACAGTTAAGTGCTGCAGCGTTTCATTATCTTTT
TAGTCTATCAGTATGGATCAGTTCCTTCACCTTCTTCATGGTCTTGTCAC
CTTTGATGGTTATAGGTCAGATACTTTTGTTGTGCTTGGGTACATATGCT
TGGGGCAGTGTATGTATGACAGCATTGGTGTTCACTGGGTCTTGGCAGGA
AA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGT
TATTTGATTTTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGAT
ATTAGTCCCCTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGT
TGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGTTTG
CAGTTTCATGAGATCCCATTTGTCAATCCTTACAGCACAAGCCATTGCTG
TTCTATTCAGGAATTTTTTCCCTGTGCCAATATCTTCGAGGCTTTTCCCC
ACTTTCTCCTCTATAAGTTTCAGTTTCTCTGGTTTTATGTGAAGTTCCTT
GATCCACTCAAATTTGACCTTAATACAAGGAGAGAGGAATGGGTCCATTC
TCATTCTTCTACATAGATAACAACCAGCTGTGCCAGTACCATTTGTTGAA
AATGCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTAATCACAATTGC
TCTGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTACTTT
TATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTN

Query= MSMg01no545_n23.b1 MSMg01no545_n23.b1 CHROMAT_FILE:
MSMg01no545_n23.b1 PHD_FILE: MSMg01no545_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:58 2005
         (599 letters)



>mm_chr7_117756190_117757188
          Length = 999

 Score =  953 bits (493), Expect = 0.0
 Identities = 511/517 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcctatgtttaccaggctggccttgaactcacagatatttgtcctcctcccacac 63
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattcctatgtagaccaggctggccttgaactcacagatatttgtcctcctcccacac 458

                                                                       
Query: 64  ccacaacaattttgaaacagtaacaaacttgaaaaagttttaagtatgatacataattat 123
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 457 ccacaacaattttgaaacagtaacaaacttgaaaaagttgtaagtatgatacataattat 398

                                                                       
Query: 124 tgttattttatttttcggacattttaagaggaagctactgcccttatgctccttcactca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgttattttatttttcggacattttaagaggaagctactgcccttatgctccttcactca 338

                                                                       
Query: 184 gaatggtttatcgtgaattttatacaaacaggaacattggtctacacaatggcagtgcag 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 337 gaatggtttatcgtgaattttatacaaacaggaacattggtctacacaatggcagtacag 278

                                                                       
Query: 244 ttgtcaaaataggaaattcaggactggagagatggcccagaggtcaagagccctggctgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttgtcaaaataggaaattcaggactggagagatggcccagaggtcaagagccctggctgc 218

                                                                       
Query: 304 tcttcagaggtcctgagttcaattcccagcaaccacatagtggctcacaaccatctgtaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tcttcagaggtcctgagttcaattcccagcaaccacatagtggctcacaaccatctgtaa 158

                                                                       
Query: 364 agggatctgataccctcttctggtgtgtctgaagacagctacagtgcactcacatacata 423
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 157 agggatctgataccctcttctggtgtgtctgaagacagctatagtgcactcacatacata 98

                                                                       
Query: 424 aaatagataaataattctttacaaaatagaaaattcatgctgacccagtattttacttaa 483
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  aaatagataactaattctttacaaaatagaaaattcatgctgacccagtattttacttaa 38

                                                
Query: 484 tttgggttttgttgattatgctattaatttcataatt 520
           |||||||||||||||||||||||||||||||||||||
Sbjct: 37  tttgggttttgttgattatgctattaatttcataatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)