Query= MSMg01no548_l23.b1 MSMg01no548_l23.b1 CHROMAT_FILE:
MSMg01no548_l23.b1 PHD_FILE: MSMg01no548_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:45 2005
(599 letters)
>mm_chr7_73889578_73890574
Length = 997
Score = 1106 bits (572), Expect = 0.0
Identities = 588/594 (98%), Gaps = 4/594 (0%)
Strand = Plus / Plus
Query: 7 gaattcaatgagatgggactaataatattcaccttctacatgagaaagtttagtttgggg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaatgagatgggactaataatattcaccttctacatgagaaagtttagtttgggg 266
Query: 67 gctggagagatgctcaatggctaagagcactggctgctttttcagaggacccatgctcaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gctggagagatgctcaatggctaagagcactggctgctttttcagaggacccatgctcaa 326
Query: 127 ttcccagctcccacatggtggctcacaaccatctgtaactccagctctaggggatctgat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcccagctcccacatggtggctcacaaccatctgtaactccagctctaggggatctgat 386
Query: 187 gccctcacacagacagacatgtaggcaaaacaccaatgtacataaaatatacaatcaacc 246
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccctcacacaggcagacatgtaggcaaaacaccaatgtacataaaatatacaatcaacc 446
Query: 247 taacaaacataaatctttttaaaaagctaactgcagtgagatctagactatcataaccag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 taacaaacataaatctttttaaaaagctaactgcagtgagatctagactatcataaccag 506
Query: 307 tgagagagagagaaagctttcttgcccctttctataccaaaatgcaaggtctaagctctt 366
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgagagagaga--aagctttcttgcccctttctataccaaaatgcaaggtctaagctctt 564
Query: 367 tcattccctattgtattagtcttccaatgtctttaacatagagagaaattcccaaagcct 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcattccctattgtattagtcttccaatgtctttaacatagagagaaattcccaaagcct 624
Query: 427 gaagtgacacttaaacattctaacttagaatccttgaaaaaaattaaacagcatgaaaag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagtgacacttaaacattctaacttagaatccttgaaaaaaattaaacagcatgaaaag 684
Query: 487 taaaagttttccttatggtatttttatgttaacttcattttggttgaatcatctgccatt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaaagttttccttatggtatttttatgttaacttcattttggttgaatcatctgccatt 744
Query: 547 tctctgccctcccttcctccccctccctccccactggtcc-ttcctccccctcc 599
|||||||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 745 tctctgccctcccttcctccccctccctccccactg-tcccttcctctccctcc 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 997
Length adjustment: 10
Effective length of query: 589
Effective length of database: 987
Effective search space: 581343
Effective search space used: 581343
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_l23.g1 MSMg01no548_l23.g1 CHROMAT_FILE:
MSMg01no548_l23.g1 PHD_FILE: MSMg01no548_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:45 2005
(607 letters)
>mm_chr7_74081408_74082418
Length = 1011
Score = 1042 bits (539), Expect = 0.0
Identities = 592/613 (96%), Gaps = 8/613 (1%)
Strand = Plus / Minus
Query: 1 attagctaagtgcttcaaaggttcatggtaacctccaacttcttgtttgtcc-----tga 55
||||||||||||||||||||||||||||||||| |||||||| |||| |||| |||
Sbjct: 811 attagctaagtgcttcaaaggttcatggtaacccccaacttcctgttcgtcctgctttga 752
Query: 56 ggtgggatggaggacatgagggtggggcccctgtgacagcattagcagctttatgagaaa 115
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggtgggatggaggacataagggtggggcccctgtgacagcattagcagctttatgagaaa 692
Query: 116 atgaggaggggcttaagttagtatgcttgctgcatactgccatgtgactctacgtgttgt 175
| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 691 aggaggaggggcttaagttagcatgcttgctgcatactgccatgtgactct--gtgttgt 634
Query: 176 actgtagcaagaagtcccttgccagatgtcaataccacatgcttggattcccaactccca 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 actgtagcaagaagtcccttgccagatgtcaataccacatgcttggattcccaactccca 574
Query: 236 gcactttaaccccaaatgagcgctactatttacaaagttacctggtctagggca-atgtg 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 573 gcactttaaccccaaatgagcgctactatttacaaagttacctggtctagggcagttgtg 514
Query: 295 ttaccacaacagaaaaaagaattaaagggattggcaaggaagtgagctaaccggtcccta 354
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 513 ttaccacaacagaaaagagaattaaagggattggcaaggaagtgagctaaccagccccta 454
Query: 355 gaatatattcttgcctcaagggaagaggaatactcaaatgtaagggtgatcagaatacgg 414
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 453 gaatatattcttgcctcaagggaagaggaatgctcaaatgtaagggtgatcagaatatgg 394
Query: 415 tcttgatagaaggtggatgacagtctgccctcagtagacatcctgatgtgagtggccaca 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcttgatagaaggtggatgacagtctgccctcagtagacatcctgatgtgagtggccaca 334
Query: 475 ggaaactgaggaagtggtacatgctggcaaaggctaccactgacgtaccactcctagaaa 534
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 333 ggaaactgaggaagtggtacatgctggcaaaggctaccactgacataccactcctagaaa 274
Query: 535 gctcttttaagggctgcattgccggggagctataggaccctgtgccaaagtgaagttggg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gctcttttaagggctgcattgccggggagctataggaccctgtgccaaagtgaagttggg 214
Query: 595 gtgacctgtctgt 607
|||||||||||||
Sbjct: 213 gtgacctgtctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1011
Length adjustment: 10
Effective length of query: 597
Effective length of database: 1001
Effective search space: 597597
Effective search space used: 597597
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
