BAC Information

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BAC

Clone NameB6Ng01-006D06
Chromosome8 (Build37)
Map Location 32,450,211 - 32,451,349
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568
Downstream gene7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006D06.bB6Ng01-006D06.g
ACCDH843129DH843130
length1,1591,116
definitionDH843129|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D06, 5' end.DH843130|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacatcagtcagaatggcttagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggccatagtactaacagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcataacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaaac
ataggattcccaagatataaggtacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccatcccatatc
agcatccaaacgctgacaccattgcatatactagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggcctagcaaac
acataactggatgctcacagtcagctaatgggatggaacacagggctccc
aatggaggagctagagaaggacccaggagctaagggatctgcaaccctat
aaggtggacacattatgactaacagtacctcgggagctctgactctagct
gctatgtatcaaaagatgcctatccgcatcactggaagaagtctattgga
caggcaacttgtatgccagtacgggacgtcaggcaaatgggatggggtgg
ggaagggag
gaattcagaattagcctatgtcatgtatctttgtgtatcattttcactgt
ttgtgacaattttcatagctgactgatcaatctagaattacttttctatt
tagctgtggcttgtcttaaggacaaaagaagtgacatatgccaaagatac
tcataagtcatgatgtaaatttctaaatgaaagttacttcagattttttt
tttttttggtgtggttacatttatttatttgtgcaaggaagttggttccc
tatttttaccacatgagtcccaggcatccaattcaggttgttatgcttgg
cagcaaatacctatacttgctaaatcatcttgctgggccctgatatgaaa
gtcctaggtcgtcattattctaaatccttacaagagtcccatgatgtgat
gttattgacattgtgagactgctttgcattgacctagagaaaacagaagc
aaagtgaaactgtctcagatttctttttgttttgttttgctcagggagca
atatacatctatatatctacatatctatatatctatatatctatatctat
acacaccatgtgcaggttcctagatcaaccttggttaagcataatctgaa
tagctcccccgatcggtattgtcataaagtattttctgtcttggaaggta
aagcccatttacagctcaaattgtatttcatggttttcttcttggcctaa
gaaagcaatacgtgcgaagtttagaaatctctcctcagtcatcacagagt
tgtgactacactcaactgtagaataaatcaaggtttagagagtttatgga
gaaaagacgtgtggactaaaaattcattcacccagggcaaatttatttct
aaagctttttattaatccttaacatgtaaataaataagagaaagagcaga
tcgaaggatataaaaagccttgtagagcactaagatgtaacagtagcctg
aatctgtgactcactttagcttcccatagaagactcttgtgatgtcaagt
ggtgcagatgccagtgcagtcaggttaagggcataactagaaactgtaaa
gctagctccttcatctcctggatggaatccagtctgttctggaggtgact
actgtgcctctacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32450211_32451349
seq2: B6Ng01-006D06.g_68_1183

seq1  GAATTCAGAATTAGCCTATGTCATGTATCTTTGTGTATCATTTTCACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATTAGCCTATGTCATGTATCTTTGTGTATCATTTTCACTGT  50

seq1  TTGTGACAATTTTCATAGCTGACTGATCAATCTAGAATTACTTTTCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACAATTTTCATAGCTGACTGATCAATCTAGAATTACTTTTCTATT  100

seq1  TAGCTGTGGCTTGTCTTAAGGACAAAAGAAGTGACATATGCCAAAGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGGCTTGTCTTAAGGACAAAAGAAGTGACATATGCCAAAGATAC  150

seq1  TCATAAGTCATGATGTAAATTTCTAAATGAAAGTTACTTCAGATTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTCATGATGTAAATTTCTAAATGAAAGTTACTTCAGATTTTTTT  200

seq1  TTTTTTTGGTGTGGTTACATTTATTTATTTGTGCAAGGAAGTTGGTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGGTGTGGTTACATTTATTTATTTGTGCAAGGAAGTTGGTTCCC  250

seq1  TATTTTTACCACATGAGTCCCAGGCATCCAATTCAGGTTGTTATGCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTACCACATGAGTCCCAGGCATCCAATTCAGGTTGTTATGCTTGG  300

seq1  CAGCAAATACCTATACTTGCTAAATCATCTTGCTGGGCCCTGATATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATACCTATACTTGCTAAATCATCTTGCTGGGCCCTGATATGAAA  350

seq1  GTCCTAGGTCGTCATTATTCTAAATCCTTACAAGAGTCCCATGATGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGGTCGTCATTATTCTAAATCCTTACAAGAGTCCCATGATGTGAT  400

seq1  GTTATTGACATTGTGAGACTGCTTTGCATTGACCTAGAGAAAACAGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGACATTGTGAGACTGCTTTGCATTGACCTAGAGAAAACAGAAGC  450

seq1  AAAGTGAAACTGTCTCAGATTTCTTTTTGTTTTGTTTTGCTCAGGGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAACTGTCTCAGATTTCTTTTTGTTTTGTTTTGCTCAGGGAGCA  500

seq1  ATATACATCTATATATCTACATATCTATATATCTATATATCTATATCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATCTATATATCTACATATCTATATATCTATATATCTATATCTAT  550

seq1  ACACACCATGTGCAGGTTCCTAGATCAACCTTGGTTAAGCATAATCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATGTGCAGGTTCCTAGATCAACCTTGGTTAAGCATAATCTGAA  600

seq1  TAGCTCCCCCGATCGGTATTGTCATAAAGTATTTTCTGTCTTGGAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCCCCGATCGGTATTGTCATAAAGTATTTTCTGTCTTGGAAGGTA  650

seq1  AAGCCCATTTACAGCTCAAATTGTATTTCATGGTTTTCTTCTTGGCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATTTACAGCTCAAATTGTATTTCATGGTTTTCTTCTTGGCCTAA  700

seq1  GAAAGCAATACGTGCGAAGTTTAGAAATCTCTCCTCAGTCATCACAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAATACGTGCGAAGTTTAGAAATCTCTCCTCAGTCATCACAGAGT  750

seq1  TGTGACTACACTCAACTGTAGAATAAATCAAGGTTTAGAGAGTTTATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTACACTCAACTGTAGAATAAATCAAGGTTTAGAGAGTTTATGGA  800

seq1  GAAAAGACGTGTGGACTAAAAATTCATTCACCCAGGGCAAATTTATTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACGTGTGGACTAAAAATTCATTCACCCAGGGCAAATTTATTTCT  850

seq1  AAAGC-TTTTATTAATCCTTAAACATGTAAATAAATAAGAAGAAAAGAGC  899
      ||||| |||||||||||||| |||||||||||||||||||   |||||||
seq2  AAAGCTTTTTATTAATCCTT-AACATGTAAATAAATAAGA--GAAAGAGC  897

seq1  AGATCGAAGGATATAAAAAGCCTTGTAAGAGCACTAAGATGTAAACAGTA  949
      |||||||||||||||||||||||||| ||||||||||||||| |||||| 
seq2  AGATCGAAGGATATAAAAAGCCTTGT-AGAGCACTAAGATGT-AACAGT-  944

seq1  ACCCTGAATCCTGTGACCTCACTTTAGCTTCCCCATAGGAAGGACTTCTT  999
      | ||||||| |||||| ||||||||||||| |||||||  | ||| ||||
seq2  AGCCTGAAT-CTGTGA-CTCACTTTAGCTT-CCCATAG--AAGAC-TCTT  988

seq1  GTGATGTCAAGTGGGTGCAAGAGGCAAGTGAGGCCAGGGTAAGGGGCACA  1049
      |||||||||||| ||||| ||| || ||||  | |||| ||| |||||  
seq2  GTGATGTCAAGT-GGTGC-AGATGCCAGTGCAGTCAGGTTAA-GGGCA-T  1034

seq1  AACTAGAAATGGTAAAAGCATACCTCCTTCATCTCCTGGATGTGAAAACC  1099
      |||||||||  || ||||| || ||||||||||||||||||| |||    
seq2  AACTAGAAACTGT-AAAGC-TAGCTCCTTCATCTCCTGGATG-GAA---T  1078

seq1  CCAGGTCTGTTCTGGAAGGTGACTACTGTGCCTCTACTTT  1139
      ||| ||||||||||| ||||||||||||||||||||||||
seq2  CCA-GTCTGTTCTGG-AGGTGACTACTGTGCCTCTACTTT  1116