BAC Information

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BAC

Clone NameB6Ng01-006F10
Chromosome8 (Build37)
Map Location 83,809,619 - 83,810,746
singlet/doubletsinglet
Overlap genenone
Upstream geneGypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010
Downstream geneLOC384852, Inpp4b, LOC671182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006F10.bB6Ng01-006F10.g
ACCDH843228DH843229
length1,2411,124
definitionDH843228|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F10, 5' end.DH843229|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctaaagaaatg
ttcagcatccttagtcatcaggcaaatgcaattcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagattaaaaactcaggtgacagc
ggattctggcaaggatatggagaaagaagaatactcctccattgctggtg
ggattgtaagctggtacaaccactctgaaaatcagtttggtggttcctca
caaaattggacatagtactactggaacatactgcaataccactctttggc
atatacccagaagatgcttcaacatgtaataaggatccatcctccatttt
gttcatagcagccatatttataatagccagaagcaggaaagaatccagat
gtccctcaatagagcaatggatacagaaaatgtggtacatttacacaata
gagtactactcagctattaaaacaatgaacacatggaatacttaagcaaa
tggatggatttggaggatataatcctgagtgaggtaaccaaatcacaaaa
gaacacacatgatatgcactcactgataagtggatattagcccagaagct
tggaatacctaagatacaattcacaaaccacatgaaacacaagaaaaagg
aagattaaagtgtagataatttgatctgtcttagaagggggaacaaaaca
cccatggaaggagttacagagacaaattgtggagcaaggactcaaggaat
gagaccgccccaccagggcatccatcccatatacaatcactaaacccaga
cactattgtggatgccaacaagtgcttgctgataagatcctgatctagct
gtctcctgcgaagctctgccagtgcctgacaaatacagaagtggatactc
acagctattcatgtgactgatcacagggtacccaatgaatgagctagaga
aatgacccaagtagttgaggggggtttgcagccccatagaggaacaacaa
tatgaaccaaccagtacccccaagctccaggactaaacaccaaccaagat
aatcaatgcaggactcatggcttctagctgcattggtagcgaagattgct
aacagtcatcaatgggagggaaagcattggttctgtgagctctatgacct
ggtttaaggaaacagtcaggactgatggtcgtgtgattgccagcgagata
aagacgttcggtctaaccgctgactatcacaagtaggacat
gaattctattaagaaacaactttggaaagctggagcctaccaaggagacc
agagcagccattggttcttcattcatttatttcactacctgaataactgt
tctcctagtacccattgcatgtcagaaatcagggacagaatctatggggc
tgggtgaatgagaagcaaaattcatattttcatgatttacattctgccga
gcaactggggaaaagcttccagaatacaatggcttcatttcttccccggt
aggaatcatgtcagcaccagggtcctgagttagaaggacactgaaggaga
gggcctggtatccataaatatgctctttaaaagcctgctttgaacaggca
agtgggccatttcactgcctacctctttagaacaggggctaaaattgcat
agtctgtgttgaaaatataaattcctgtagaaaattcagagtctcaaatt
ttcttttattgctatgatagaattgtgactctatgtaattggctgtttca
gcatcccacttgactttgttattatagacctagaccagaatgaaccacag
actgaggaaatatgtaagcctttgctcgctgatggctggtttgaaaagta
ggtgtttaacaaaggctgtgctcaaacccgcagcttagtcataacaagtg
aacttaatgtcatccctctgccttgtcattcagggtaagtacttactaca
gttaagctctgtgggttaagagacccaagcttaaagatagatatcttcta
tcaactacaggcatgcagcttcagtgttatctcacttcctgaagttttca
gaagctaacttatttattgcattttgccttatttttaatcctaaaatagg
agtgctaatacatgtggccacagaggctgacagtaaaggcaggaacttca
gtagccagtcaaaattttcttgttgtttactggtaaagaaagagctcatg
tttccatcgcatttaaaagatcgacctgctcttgctcctttaaaggaata
aagtaaattgtcatggaaatagctgccctttaaagatctttatgcaattt
ggtagaagggctagcagctaggaggaagctaatatacctgtgggcaaatg
aaaaatggggttggtttgcttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_83809619_83810746
seq2: B6Ng01-006F10.g_65_1188

seq1  GAATTCTATTAAGAAACAACTTTGGAAAGCTGGAGCCTACCAAGGAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTAAGAAACAACTTTGGAAAGCTGGAGCCTACCAAGGAGACC  50

seq1  AGAGCAGCCATTGGTTCTTCATTCATTTATTTCACTACCTGAATAACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCATTGGTTCTTCATTCATTTATTTCACTACCTGAATAACTGT  100

seq1  TCTCCTAGTACCCATTGCATGTCAGAAATCAGGGACAGAATCTATGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGTACCCATTGCATGTCAGAAATCAGGGACAGAATCTATGGGGC  150

seq1  TGGGTGAATGAGAAGCAAAATTCATATTTTCATGATTTACATTCTGCCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAATGAGAAGCAAAATTCATATTTTCATGATTTACATTCTGCCGA  200

seq1  GCAACTGGGGAAAAGCTTCCAGAATACAATGGCTTCATTTCTTCCCCGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGGGGAAAAGCTTCCAGAATACAATGGCTTCATTTCTTCCCCGGT  250

seq1  AGGAATCATGTCAGCACCAGGGTCCTGAGTTAGAAGGACACTGAAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCATGTCAGCACCAGGGTCCTGAGTTAGAAGGACACTGAAGGAGA  300

seq1  GGGCCTGGTATCCATAAATATGCTCTTTAAAAGCCTGCTTTGAACAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGTATCCATAAATATGCTCTTTAAAAGCCTGCTTTGAACAGGCA  350

seq1  AGTGGGCCATTTCACTGCCTACCTCTTTAGAACAGGGGCTAAAATTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCCATTTCACTGCCTACCTCTTTAGAACAGGGGCTAAAATTGCAT  400

seq1  AGTCTGTGTTGAAAATATAAATTCCTGTAGAAAATTCAGAGTCTCAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGTTGAAAATATAAATTCCTGTAGAAAATTCAGAGTCTCAAATT  450

seq1  TTCTTTTATTGCTATGATAGAATTGTGACTCTATGTAATTGGCTGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATTGCTATGATAGAATTGTGACTCTATGTAATTGGCTGTTTCA  500

seq1  GCATCCCACTTGACTTTGTTATTATAGACCTAGACCAGAATGAACCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCACTTGACTTTGTTATTATAGACCTAGACCAGAATGAACCACAG  550

seq1  ACTGAGGAAATATGTAAGCCTTTGCTCGCTGATGGCTGGTTTGAAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGAAATATGTAAGCCTTTGCTCGCTGATGGCTGGTTTGAAAAGTA  600

seq1  GGTGTTTAACAAAGGCTGTGCTCAAACCCGCAGCTTAGTCATAACAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTAACAAAGGCTGTGCTCAAACCCGCAGCTTAGTCATAACAAGTG  650

seq1  AACTTAATGTCATCCCTCTGCCTTGTCATTCAGGGTAAGTACTTACTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATGTCATCCCTCTGCCTTGTCATTCAGGGTAAGTACTTACTACA  700

seq1  GTTAAGCTCTGTGGGTTAAGAGACCCAAGCTTAAAGATAGATATCTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCTCTGTGGGTTAAGAGACCCAAGCTTAAAGATAGATATCTTCTA  750

seq1  TCAACTACAGGCATGCAGCTTCAGTGTTATCTCACTTCCTGAAGTTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTACAGGCATGCAGCTTCAGTGTTATCTCACTTCCTGAAGTTTTCA  800

seq1  GAAGCTAACTTATTTATTGCATTTTGCCTTATTTTTAATCCTAAAATAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAACTTATTTATTGCATTTTGCCTTATTTTTAATCCTAAAATAGG  850

seq1  AGTGCTAATACATGTGGCCACAGAGGCTGACAGTAAAGGCAGGAACTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAATACATGTGGCCACAGAGGCTGACAGTAAAGGCAGGAACTTCA  900

seq1  GTAGCCAGTCAAAATTTTCTTGTTGTTTACTGGTAAAGAAAAGAGCTCAT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTAGCCAGTCAAAATTTTCTTGTTGTTTACTGGTAAAG-AAAGAGCTCAT  949

seq1  GTTTCCATCGCA-TTAAAAGATCGACCTGCTCCTTTGCTCCTTTAAAGGA  999
      |||||||||||| |||||||||||||||||||  ||||||||||||||||
seq2  GTTTCCATCGCATTTAAAAGATCGACCTGCTC--TTGCTCCTTTAAAGGA  997

seq1  ATAAAGTAAATTGTCATGGAATTAGCTGCCCTTTTAAAGACTCTTATGCA  1049
      ||||||||||||||||||||| ||||||||| ||||||||   |||||||
seq2  ATAAAGTAAATTGTCATGGAAATAGCTGCCC-TTTAAAGATCTTTATGCA  1046

seq1  AATTGGTAGCAGGGCTTAGCAGCTAGGGAGGAAGCT--GATAACTGT-GG  1096
      | ||||||| ||||| ||||||||| ||||||||||   ||| |||| ||
seq2  ATTTGGTAGAAGGGC-TAGCAGCTA-GGAGGAAGCTAATATACCTGTGGG  1094

seq1  CAAATGAGAAAATGGGGGTGCGTTTGCTTATA  1128
      ||||||| ||||||||| || |||||||||||
seq2  CAAATGA-AAAATGGGGTTG-GTTTGCTTATA  1124