BAC Information

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BAC

Clone NameB6Ng01-007O09
Chromosome8 (Build37)
Map Location 130,528,462 - 130,529,497
singlet/doubletsinglet
Overlap genenone
Upstream geneGabarapl2-ps8_1688.1, Pard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007O09.bB6Ng01-007O09.g
ACCDH844333DH844334
length1,0491,027
definitionDH844333|Mus musculus domesticus DNA, BAC clone: B6Ng01-007O09, 5' end.DH844334|Mus musculus domesticus DNA, BAC clone: B6Ng01-007O09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagataatcatgtgttttttgtcttt
gagtttatttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgcat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgtactaaacccatctg
gtcctgggcttttttttggctgggagactattaataactgcttctatttc
tttaggtgatatgggactgtttagatggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagtggatattagcccaaaacctaggatacc
caagatataagatacaatttgctaaacacatgaaactcaagaaaaatgaa
gactgaagtgtggacactatgatcctccttagaagtggaaacaaaacacc
catggaaggagttacagagacaaagtttgtagctgagacgaaaggatgga
ccatctagagactgccatatccagggatccaccccataatcagcttccaa
acgctgacaccattgcatacactagcaagattttatcgaaaggacccaga
tgagctgtctcttgtgagactaggccggggcctagcaaacacagaagtgg
atgctcacagtcagctaatgggatgggatcacagggctcccaatggagga
gctagagaagtacccaaaggagctaaagggaatctgcatccctatagttg
aacaacattatgaactatccgtactcccgaaactcttgatctctgatgc
gaattcctggagtttgttccattcccttcaccactgctataggggacagt
gggacaccagggtctgagtctgccagaggaaatgaacagtaaagacacat
atatgtgtacatatgtgtactgttgtttgttgacatggagacaggcaggt
ctctgatttttagggtaaattgacagaatgcagacaataactgtcaccat
agtcttagggagaatttgttctctgaggactcttcttagagactggggag
gctcactcacttcaggataatttctttttctcaaattctactgcttacag
atgatattgatcactcctaaaatctttctagtgcaaggctgagcctttca
tactgctgtattcctactggtttagagatttcagatgggcctaagaccat
caagttctgcaataaggaaattatggcatgccttacataaagactacatg
atgtgtatctgttaagtgatgatcattgccctgcatgaggttctctcagg
catgaattctgttgctgctggcatgaagttctatattctgtgggtgttac
atgtctgttttgtatatgtaaatatttttaaatggaaacagagaaagaca
gaatgaggataagaataaaagaactatggaaactttaatattgtacctat
ggaattatctagaccattgagacccagtgagaagccagaacaataataaa
ggaagactagaagcaagagaatatgtattttgtatgagtttatgtaaatt
cccataagcatatgaaaaacaactggttttaaaggtgggaagggattgct
agtgactgaactccatgtgtctcaagcactaagcatgaactcttctactg
agccacacccccagtgccttgtactaactaaaatctaatggttaggatcc
tacgataaaaatagaaaacttattttcctattttcaatgaacggtagctt
cccaatttcttcctgaacgataatagcctgtctattcatcacaggtagct
tccctctttcattaagggtagttttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130528462_130529497
seq2: B6Ng01-007O09.g_69_1095

seq1  GAATTCCTGGAGTTTGTTCCATTCCCTTCACCACTGCTATAGGGGACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGTTTGTTCCATTCCCTTCACCACTGCTATAGGGGACAGT  50

seq1  GGGACACCAGGGTCTGAGTCTGCCAGAGGAAATGAACAGTAAAGACACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACCAGGGTCTGAGTCTGCCAGAGGAAATGAACAGTAAAGACACAT  100

seq1  ATATGTGTACATATGTGTACTGTTGTTTGTTGACATGGAGACAGGCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTACATATGTGTACTGTTGTTTGTTGACATGGAGACAGGCAGGT  150

seq1  CTCTGATTTTTAGGGTAAATTGACAGAATGCAGACAATAACTGTCACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTTTAGGGTAAATTGACAGAATGCAGACAATAACTGTCACCAT  200

seq1  AGTCTTAGGGAGAATTTGTTCTCTGAGGACTCTTCTTAGAGACTGGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGGGAGAATTTGTTCTCTGAGGACTCTTCTTAGAGACTGGGGAG  250

seq1  GCTCACTCACTTCAGGATAATTTCTTTTTCTCAAATTCTACTGCTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCACTTCAGGATAATTTCTTTTTCTCAAATTCTACTGCTTACAG  300

seq1  ATGATATTGATCACTCCTAAAATCTTTCTAGTGCAAGGCTGAGCCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTGATCACTCCTAAAATCTTTCTAGTGCAAGGCTGAGCCTTTCA  350

seq1  TACTGCTGTATTCCTACTGGTTTAGAGATTTCAGATGGGCCTAAGACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTATTCCTACTGGTTTAGAGATTTCAGATGGGCCTAAGACCAT  400

seq1  CAAGTTCTGCAATAAGGAAATTATGGCATGCCTTACATAAAGACTACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTGCAATAAGGAAATTATGGCATGCCTTACATAAAGACTACATG  450

seq1  ATGTGTATCTGTTAAGTGATGATCATTGCCCTGCATGAGGTTCTCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATCTGTTAAGTGATGATCATTGCCCTGCATGAGGTTCTCTCAGG  500

seq1  CATGAATTCTGTTGCTGCTGGCATGAAGTTCTATATTCTGTGGGTGTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTCTGTTGCTGCTGGCATGAAGTTCTATATTCTGTGGGTGTTAC  550

seq1  ATGTCTGTTTTGTATATGTAAATATTTTTAAATGGAAACAGAGAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTTTTGTATATGTAAATATTTTTAAATGGAAACAGAGAAAGACA  600

seq1  GAATGAGGATAAGAATAAAAGAACTATGGAAACTTTAATATTGTACCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGATAAGAATAAAAGAACTATGGAAACTTTAATATTGTACCTAT  650

seq1  GGAATTATCTAGACCATTGAGACCCAGTGAGAAGCCAGAACAATAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATCTAGACCATTGAGACCCAGTGAGAAGCCAGAACAATAATAAA  700

seq1  GGAAGACTAGAAGCAAGAGAATATGTA-TTTGTATGAGTTTATGTAAATT  749
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGAAGACTAGAAGCAAGAGAATATGTATTTTGTATGAGTTTATGTAAATT  750

seq1  CCCATAAGCATATGAAAAACAACTGGTTTTAAAGGTGGGAAGGGATTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGCATATGAAAAACAACTGGTTTTAAAGGTGGGAAGGGATTGCT  800

seq1  AGTGACTGAACTCCATGTGTCTCAAGCACTAAGCATGAACTCTTCTACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGAACTCCATGTGTCTCAAGCACTAAGCATGAACTCTTCTACTG  850

seq1  AGCCACACCCCCAGTGCCTTGTAACTAACTTAAAATCTAATGGTTAGAAT  899
      |||||||||||||||||||||| |||||| ||||||||||||||||| ||
seq2  AGCCACACCCCCAGTGCCTTGT-ACTAAC-TAAAATCTAATGGTTAGGAT  898

seq1  CTAACGATTAAAATAGAACACTTAATTTTCCTATTTTCAATGAACGGGTA  949
      |  ||||| ||||||||| |||| ||||||||||||||||||||| ||||
seq2  CCTACGATAAAAATAGAAAACTT-ATTTTCCTATTTTCAATGAAC-GGTA  946

seq1  GCTTCCCAATTTCTTCACTGAACGAATAATAGGCCTGTCTATATCATCAC  999
      |||||||||||||||| ||||||| |||||| |||||||||| |||||||
seq2  GCTTCCCAATTTCTTC-CTGAACG-ATAATA-GCCTGTCTAT-TCATCAC  992

seq1  AGGTAGTCTCCCTCTCTTCATTAAATGGTAGTTTTAT  1036
      ||||||  ||||||| |||||| || |||||||||||
seq2  AGGTAGCTTCCCTCT-TTCATT-AAGGGTAGTTTTAT  1027