BAC Information

Click to search

BAC

Clone NameB6Ng01-011D01
Chromosome8 (Build37)
Map Location 8,084,871 - 8,086,045
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011D01.bB6Ng01-011D01.g
ACCDH846640DH846641
length1,1641,152
definitionDH846640|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D01, 5' end.DH846641|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatatcttgtttcatcacacattgtaagagtgtttatttcaagc
atttcaatattgctatttattttgtatttcatttttcaggttaaaaaata
tcaaaaaatgtgtctgctaggtacacttttaagttctgtgtgagttatgt
acatgcatcttttatcttcattgatttaatgttttaataaagaatacatc
tgatatacatgtaaccacagttagctaactgatcttatacaggatggaca
tatcaaaaggctttataatctttatctatgtcatagattctatgatacgt
tttatgaaagacatttatcttcaagacataaaacttcaaaatgtctgtct
agtatgagacaccaaagtaatttgaataataaaacattttcaaataaaat
atgccaatattttatgaggagattcatgagattaaaaacaatcacttgtt
atagaatttgtggcagtgactaaaggaagtcatatcacaccaatgtctgc
tcaagaatatatcaatgtgttggggacatgtagggacagttcttttcatg
gtactgtccaagtcagagtactttatgaaataaatcatgcccagggatta
tagcagattacttgagcatattgtgaaaaagatcatgagtgtgaaaatag
tgggtttctaataaaccatgattgtttttttttcatatattactgaaaac
tagtatccttgccatctgtcttcataatgggggtcaccttaaaattgtgt
ctatgtgcaaagatctacccattcttccagaaacagatgaagtaccaaat
ctctcacatcatcacacacgccttaaaatgaaaatgcagtttcattgacc
aagaaccagagggctggccaccatgttgcttgtttgtgtccaggtatgat
ggcccctctgccctagggtatgatgtgtgcttttcagagcatgatgattt
tgtgagtgactttttatgaaccaactactctcactcacaatgaggataaa
ggtagagatgtggcatcagtggtaaattcttaagtggtttatgtgagaac
tctgcatcagtattcagcactgaaaaaattgaggaggtgaggagaaaaag
tcaagccagttgtctatctagatctaaaacttggcagagatgaattcatg
ctcctcaaagctgc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaaa
tgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaag
attccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaga
gcagatgctggcgaggatgtggagaaagaggaacactcctccattgttgg
tgagattgcaagcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaattgcacatagtaataccagaggatcctgcaatacctctcctgg
gcatatatccagaagatgttccaactggtaagaaggacacatgctccact
atattcatagcagccttatttataatagacagaagctggaaagaacccag
atgcccctcaacagaggaatggatacaggaaatgtggtacatctacacaa
tggagtactactcagctattaaaaagaataaatttatgaaattcctaggc
aaatggatggatctggagggcatcatcctgagtgaggtaacccaatcaca
aaggaactcacacaatatgtgctcactgataagtggatattagcccaaaa
acttaggatacccaagatataagatataatttgctaaacacatgaaactc
aagaagaacgaagaccaaagtgtggacactttgcccttcttagaattggg
aacaaaacatccatggaaggagttacagagacaatgtttggagctgtgat
gaaaggatgaaccatctagagactgccatatctggggatccatcccataa
tcatcttccaaacgctgacaccattgcacacactagaaagattttgctga
aaggacccagatagagctctctcttgtgagactatgccggggtctagcaa
acacagaagtggatgctcacattcagctattggatggatcacagggtcct
caatgaagagtagagaaagtacccagagctaaaggatctgcaccttatag
tggacacattatgactatcagtactcctggttctgactctagctgcaatg
tatcaagatgctagtcgcatcactgaaagaaagtcatggactgcaatctt
aatgtctaatgaccgggaaatgctagggtcaacaagtgggatgtgattgc
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8084871_8086045
seq2: B6Ng01-011D01.b_44_1207 (reverse)

seq1  GCAGCTTTGTGGAAGCATGTGATTCATCTTCTTGCAAGATCTTAGATCTT  50
      ||||||||| || ||||||  ||||||| |||  |||| | ||||||| |
seq2  GCAGCTTTGAGG-AGCATG-AATTCATC-TCTGCCAAG-TTTTAGATC-T  45

seq1  AGATAGACCACTTGCTTGCTATTTTCTCCTCACCTCCTCCAATTTTTTTT  100
      |||||||| ||| |||||   |||||||||||||||||| |   ||||||
seq2  AGATAGACAACTGGCTTGACTTTTTCTCCTCACCTCCTCAA---TTTTTT  92

seq1  CAGTGCTGAATACTGAATGCAGAG-TCTCACATAAACCACTTAAGAATTT  149
      ||||||||||||||| |||||||| |||||||||||||||||||||| ||
seq2  CAGTGCTGAATACTG-ATGCAGAGTTCTCACATAAACCACTTAAGAA-TT  140

seq1  TACCACTGATGCCACATCTCTACCTTTTATCCTTCATTGTTGAGTGAGAG  199
      |||||||||||||||||||||||| ||||||| |||||| ||||||||||
seq2  TACCACTGATGCCACATCTCTACC-TTTATCC-TCATTG-TGAGTGAGAG  187

seq1  TAGTTGGTTCATAAAAAGTCACTCACAAAATCATCATGCTCTG-AAAGCA  248
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGTTGGTTCATAAAAAGTCACTCACAAAATCATCATGCTCTGAAAAGCA  237

seq1  CACATCATACCCTAGGGCAGAGGGGCCATCATACCTGGACACAAACAAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATACCCTAGGGCAGAGGGGCCATCATACCTGGACACAAACAAGC  287

seq1  AACATGGTGGCCAGCCCTCTGGTTCTTGGTCAATGAAACTGCATTTTCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGGCCAGCCCTCTGGTTCTTGGTCAATGAAACTGCATTTTCAT  337

seq1  TTTAAGGCGTGTGTGATGATGTGAGAGATTTGGTACTTCATCTGTTTCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCGTGTGTGATGATGTGAGAGATTTGGTACTTCATCTGTTTCTG  387

seq1  GAAGAATGGGTAGATCTTTGCACATAGACACAATTTTAAGGTGACCCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGGGTAGATCTTTGCACATAGACACAATTTTAAGGTGACCCCCA  437

seq1  TTATGAAGACAGATGGCAAGGATACTAGTTTTCAGTAATATATGAAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGACAGATGGCAAGGATACTAGTTTTCAGTAATATATGAAAAAA  487

seq1  AAACAATCATGGTTTATTAGAAACCCACTATTTTCACACTCATGATCTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCATGGTTTATTAGAAACCCACTATTTTCACACTCATGATCTTT  537

seq1  TTCACAATATGCTCAAGTAATCTGCTATAATCCCTGGGCATGATTTATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATATGCTCAAGTAATCTGCTATAATCCCTGGGCATGATTTATTT  587

seq1  CATAAAGTACTCTGACTTGGACAGTACCATGAAAAGAACTGTCCCTACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTACTCTGACTTGGACAGTACCATGAAAAGAACTGTCCCTACAT  637

seq1  GTCCCCAACACATTGATATATTCTTGAGCAGACATTGGTGTGATATGACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAACACATTGATATATTCTTGAGCAGACATTGGTGTGATATGACT  687

seq1  TCCTTTAGTCACTGCCACAAATTCTATAACAAGTGATTGTTTTTAATCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAGTCACTGCCACAAATTCTATAACAAGTGATTGTTTTTAATCTC  737

seq1  ATGAATCTCCTCATAAAATATTGGCATATTTTATTTGAAAATGTTTTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTCCTCATAAAATATTGGCATATTTTATTTGAAAATGTTTTATT  787

seq1  ATTCAAATTACTTTGGTGTCTCATACTAGACAGACATTTTGAAGTTTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTACTTTGGTGTCTCATACTAGACAGACATTTTGAAGTTTTAT  837

seq1  GTCTTGAAGATAAATGTCTTTCATAAAACGTATCATAGAATCTATGACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAGATAAATGTCTTTCATAAAACGTATCATAGAATCTATGACAT  887

seq1  AGATAAAGATTATAAAGCCTTTTGATATGTCCATCCTGTATAAGATCAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGATTATAAAGCCTTTTGATATGTCCATCCTGTATAAGATCAGT  937

seq1  TAGCTAACTGTGGTTACATGTATATCAGATGTATTCTTTATTAAAACATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAACTGTGGTTACATGTATATCAGATGTATTCTTTATTAAAACATT  987

seq1  AAATCAATGAAGATAAAAGATGCATGTACATAACTCACACAGAACTTAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATGAAGATAAAAGATGCATGTACATAACTCACACAGAACTTAAA  1037

seq1  AGTGTACCTAGCAGACACATTTTTTGATATTTTTTAACCTGAAAAATGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACCTAGCAGACACATTTTTTGATATTTTTTAACCTGAAAAATGAA  1087

seq1  ATACAAAATAAATAGCAATATTGAAATGCTTGAAATAAACACTCTTACAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATAAATAGCAATATTGAAATGCTTGAAATAAACACTCTTACAA  1137

seq1  TGTGTGATGAAACAAGATATAGAATTC  1175
      |||||||||||||||||||||||||||
seq2  TGTGTGATGAAACAAGATATAGAATTC  1164