BAC Information

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BAC

Clone NameB6Ng01-013O20
Chromosome8 (Build37)
Map Location 32,935,259 - 33,069,197
singlet/doubletdoublet
Overlap geneNrg1
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340
Downstream gene2010007E15Rik, EG666589, EG546052, LOC100042715
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O20.bB6Ng01-013O20.g
ACCDH848619DH848620
length1,1021,183
definitionDH848619|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O20, 5' end.DH848620|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,068,093 - 33,069,197)(32,935,259 - 32,936,478)
sequence
gaattctgaacccagaagagtgtatgtattatactgacgctgaggatgga
tttctgccactagcttacactgctctgctctctgtctcacaggaagtcag
agcttcgaatcaacaaagcgtccctggctgactctggagaatatatgtgc
aaagtgatcagcaagttaggaaacgacagtgcctctgccaacatcaccat
tgttgagtcaaacggtaagacacccacttccctctgtttctcagtctgtg
acaggagggttagagatgcgtgataaatcgatgagtgaagtcttatcatg
gacaagagagaaacacaggagaagaagacaaacattagtggcatcttttg
tgttctctgtcaaggtcttcattgcatgtgatgatatagatgatatatgt
atattacataattatataatatatattttatacacatacatttatatata
tatatacacatatatacaggtacaacagtgatatatatatatatatatat
atatgtatatatatatatattacaaacacatgaatgaatgcatctacttt
atatccaagtccttaaaagttttatattctaaaatgtatttttaagtcgt
tacaccaaaccaacagaaagttagatacattacctttagggctattaatt
ttgaattcaggaacaccttagaggcaatgaatttacaactttgcaaaggc
ttctcgctgagctgagagccattcccgggaggatttattacacaactgaa
ggactcagaggtgggaagaactacctgcccattaacaacctcccccagtc
tcctaggaattccgaaggcaaccgctgctgactgtgtcttctgtaactca
gtagccggacctctgagggtcatgtctagggctggtgatagtctagcaat
gcttcttcaaatcttggggctctcaagagccgtttcaaaaccttacttta
tatattgtgcccttaatgattgtcatttttgtaagctcaatcctgtttct
cttgcttcttggggagagatgatactatctgtcatacggaagggcaagtg
gcagtttatatatggggagggagtaagagtatatggttaactcctaggaa
at
gaattcttatggaaatgtagttaattgtactgaaggagaacaaaaaagga
gaaaagaacccaaatgcattagtattaggctaacctctcaaccatctatg
tctaaattgtacagatagccattggtcttactataggattaatgaggctg
attccatttataaattttcctatggattgcttaagaagattaatttagct
tttcattggtatatctcatatagctactatgtgtgcatatcccatacatc
tctgtggaactttgggtatagtttaccattatattttggcacaattgtaa
caagactctatactttgcaactttacaaaagagaaaaaaaaaaaagaaaa
aagaaaaaaaagaaaaaaggtagccgggcagtggtggcacacgcctttaa
tcccagcacttgggaggcagagacaggcggacttctgagttcaaggccag
cctggtctacaaagtgagttccaggacagccaagactatacagagaaacc
ctgtctcgaaaaaccaaaaaaaaaaaaaaaaaaaaagaaaagaaaagaaa
agaaaaaaggtgataaatattcaaatttgaatctaataagacttttgatg
ccagttctgtgattgtctgtctttttcactctctccttgcagcatttatt
catttatttattcatttatttatttattgagataccatggaaacataatt
tatgctgtagattttgtggcaaaatatttgcatgttacctctgttttcta
gtacaacatttagatcaagacactcccaagattagttttgacctgaaaat
attatgtcatcaaacaaaacccaaacaacactctataactgaaaattaca
tttacactcaagaaatcctaagtgtagaatgggactcattagtcagctaa
tgtgtgtgctagctggacactgtagaaggctagcatggtgactatatagc
ttaaggttttctttaaacttttttcaaacaaatttgactgcttcttcttc
acaaatctttatattactgcaatttatagagcattatttggaactaatag
attaagaactaatctaattttacgtcaaaaacatctccccacacactgaa
ttgttatcaaggacttcttaagattggtctcaactcaggtatcgttggca
gtgtgactcttagtagaaggtcttgtgtgggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33068093_33069197
seq2: B6Ng01-013O20.b_48_1149 (reverse)

seq1  ATTTCCTAAGAAATTAACCATATACTCTTTACTCC--TCCCATA-ATAAA  47
      ||||||| || | |||||||||||||| |||||||   |||||| |||||
seq2  ATTTCCT-AGGAGTTAACCATATACTC-TTACTCCCTCCCCATATATAAA  48

seq1  CTGCCACTTTGCCCTTTCGTTATGACAGATAGATTCATCTCT-CCCAAGA  96
      ||||||| |||||||| || ||||||||||||  |||||||| |||||||
seq2  CTGCCAC-TTGCCCTTCCG-TATGACAGATAGTATCATCTCTCCCCAAGA  96

seq1  AGC-AGAGAAACCAGGATTGGGCTTACAAAAATGAACAATCATTTAAGGG  145
      ||| ||||||| |||||||| ||||||||||||| ||||||| |||||||
seq2  AGCAAGAGAAA-CAGGATTGAGCTTACAAAAATG-ACAATCA-TTAAGGG  143

seq1  CACAATATATAAAGTAAGGTTTTGAAACGGCTCCTGAGAGCCCCAAGATT  195
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CACAATATATAAAGTAAGGTTTTGAAACGGCTCTTGAGAGCCCCAAGATT  193

seq1  TGAAGAAGCATTGCTAGACTATCACCAGCCCTAGACATGACCCTCAGAGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGCATTGCTAGACTATCACCAGCCCTAGACATGACCCTCAGAGG  243

seq1  TCCGGCTACTGAGTTACAGAAGACACAGTCAGCAGCGGTTGCCTTCGGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGCTACTGAGTTACAGAAGACACAGTCAGCAGCGGTTGCCTTCGGAA  293

seq1  TTCCTAGGAGACCTGGGGGAGGTTGTTAATGGGCAGGTAGTTCTTCCCAC  345
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGGAGA-CTGGGGGAGGTTGTTAATGGGCAGGTAGTTCTTCCCAC  342

seq1  CTCTGAGTCCTTCAGTTGTGTAATAAATCCTCCCGGGAATGGCTCTCAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCCTTCAGTTGTGTAATAAATCCTCCCGGGAATGGCTCTCAGC  392

seq1  TCAGCGAGAAGCCTTTGCAAAGTTGTAAATTCATTGCCTCTAAGGTGTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGAGAAGCCTTTGCAAAGTTGTAAATTCATTGCCTCTAAGGTGTTC  442

seq1  CTGAATTCAAAATTAATAGCCCTAAAGGTAATGTATCTAACTTTCTGTTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCAAAATTAATAGCCCTAAAGGTAATGTATCTAACTTTCTGTTG  492

seq1  GTTTGGTGTAACGACTTAAAAATACATTTTAGAATATAAAACTTTTAAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTGTAACGACTTAAAAATACATTTTAGAATATAAAACTTTTAAGG  542

seq1  ACTTGGATATAAAGTAGATGCATTCATTCATGTGTTTGTAATATATATAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATATAAAGTAGATGCATTCATTCATGTGTTTGTAATATATATAT  592

seq1  ATATACATATATATATATATATATATATATCACTGTTGTACCTGTATATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATATATATATATATATATATATCACTGTTGTACCTGTATATA  642

seq1  TGTGTATATATATATATAAATGTATGTGTATAAAATATATATTATATAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATATATATATAAATGTATGTGTATAAAATATATATTATATAAT  692

seq1  TATGTAATATACATATATCATCTATATCATCACATGCAATGAAGACCTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATATACATATATCATCTATATCATCACATGCAATGAAGACCTTG  742

seq1  ACAGAGAACACAAAAGATGCCACTAATGTTTGTCTTCTTCTCCTGTGTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAACACAAAAGATGCCACTAATGTTTGTCTTCTTCTCCTGTGTTT  792

seq1  CTCTCTTGTCCATGATAAGACTTCACTCATCGATTTATCACGCATCTCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGTCCATGATAAGACTTCACTCATCGATTTATCACGCATCTCTA  842

seq1  ACCCTCCTGTCACAGACTGAGAAACAGAGGGAAGTGGGTGTCTTACCGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTGTCACAGACTGAGAAACAGAGGGAAGTGGGTGTCTTACCGTT  892

seq1  TGACTCAACAATGGTGATGTTGGCAGAGGCACTGTCGTTTCCTAACTTGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAACAATGGTGATGTTGGCAGAGGCACTGTCGTTTCCTAACTTGC  942

seq1  TGATCACTTTGCACATATATTCTCCAGAGTCAGCCAGGGACGCTTTGTTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTTTGCACATATATTCTCCAGAGTCAGCCAGGGACGCTTTGTTG  992

seq1  ATTCGAAGCTCTGACTTCCTGTGAGACAGAGAGCAGAGCAGTGTAAGCTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGAAGCTCTGACTTCCTGTGAGACAGAGAGCAGAGCAGTGTAAGCTA  1042

seq1  GTGGCAGAAATCCATCCTCAGCGTCAGTATAATACATACACTCTTCTGGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGAAATCCATCCTCAGCGTCAGTATAATACATACACTCTTCTGGG  1092

seq1  TTCAGAATTC  1105
      ||||||||||
seq2  TTCAGAATTC  1102

seq1: chr8_32935259_32936478
seq2: B6Ng01-013O20.g_66_1248

seq1  GAATTCTTATGGAAATGTAGTTAATTGTACTGAAGGAGAACAAAAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGGAAATGTAGTTAATTGTACTGAAGGAGAACAAAAAAGGA  50

seq1  GAAAAGAACCCAAATGCATTAGTATTAGGCTAACCTCTCAACCATCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAACCCAAATGCATTAGTATTAGGCTAACCTCTCAACCATCTATG  100

seq1  TCTAAATTGTACAGATAGCCATTGGTCTTACTATAGGATTAATGAGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTGTACAGATAGCCATTGGTCTTACTATAGGATTAATGAGGCTG  150

seq1  ATTCCATTTATAAATTTTCCTATGGATTGCTTAAGAAGATTAATTTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTATAAATTTTCCTATGGATTGCTTAAGAAGATTAATTTAGCT  200

seq1  TTTCATTGGTATATCTCATATAGCTACTATGTGTGCATATCCCATACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGGTATATCTCATATAGCTACTATGTGTGCATATCCCATACATC  250

seq1  TCTGTGGAACTTTGGGTATAGTTTACCATTATATTTTGGCACAATTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAACTTTGGGTATAGTTTACCATTATATTTTGGCACAATTGTAA  300

seq1  CAAGACTCTATACTTTGCAACTTTACAAAAGAGAAAAAAAAAAAAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTCTATACTTTGCAACTTTACAAAAGAGAAAAAAAAAAAAGAAAA  350

seq1  AAGAAAAAAAAGAAAAAAGGTAGCCGGGCAGTGGTGGCACACGCCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAAAGAAAAAAGGTAGCCGGGCAGTGGTGGCACACGCCTTTAA  400

seq1  TCCCAGCACTTGGGAGGCAGAGACAGGCGGACTTCTGAGTTCAAGGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACTTGGGAGGCAGAGACAGGCGGACTTCTGAGTTCAAGGCCAG  450

seq1  CCTGGTCTACAAAGTGAGTTCCAGGACAGCCAAGACTATACAGAGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAAAGTGAGTTCCAGGACAGCCAAGACTATACAGAGAAACC  500

seq1  CTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAA  550

seq1  AGAAAAAAGGTGATAAATATTCAAATTTGAATCTAATAAGACTTTTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGGTGATAAATATTCAAATTTGAATCTAATAAGACTTTTGATG  600

seq1  CCAGTTCTGTGATTGTCTGTCTTTTTCACTCTCTCCTTGCAGCATTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTGTGATTGTCTGTCTTTTTCACTCTCTCCTTGCAGCATTTATT  650

seq1  CATTTATTTATTCATTTATTTATTTATTGAGATACCATGGAAACATAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTATTCATTTATTTATTTATTGAGATACCATGGAAACATAATT  700

seq1  TATGCTGTAGATTTTGTGGCAAAATATTTGCATGTTACCTCTGTTTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGTAGATTTTGTGGCAAAATATTTGCATGTTACCTCTGTTTTCTA  750

seq1  GTACAACATTTAGATCAAGACACTCCCAAGATTAGTTTTGACCTGAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACATTTAGATCAAGACACTCCCAAGATTAGTTTTGACCTGAAAAT  800

seq1  ATTATGTCATCAAACAAAACCCAAACAACACTCTATTAACTGAAAATTAC  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTATGTCATCAAACAAAACCCAAACAACACTCTA-TAACTGAAAATTAC  849

seq1  ATTTACACCTCAAGAAATCCTAAGTGTAGAATGGGACTCATTAGTCAGCT  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACA-CTCAAGAAATCCTAAGTGTAGAATGGGACTCATTAGTCAGCT  898

seq1  AATGTGTGTGCTAGCCTGGACACCTGTAGAAGGCCTAGCATGGTGACTAT  950
      |||||||||||||| ||||||| |||||||||| ||||||||||||||||
seq2  AATGTGTGTGCTAG-CTGGACA-CTGTAGAAGG-CTAGCATGGTGACTAT  945

seq1  ATAGCCTTAAGGTTTTCTTTTAAACTTTTTTTCCAAACAAATTTGACTTG  1000
      |||| |||||||||||| |||||||||||||  |||||||||||||| ||
seq2  ATAG-CTTAAGGTTTTC-TTTAAACTTTTTT--CAAACAAATTTGAC-TG  990

seq1  CTTCTCCTTCCACAAAAATTCCTTTATA-TACTGCACATTTATAGAGCAT  1049
      ||||| ||| ||||||     ||||||| ||||||| |||||||||||||
seq2  CTTCTTCTT-CACAAA----TCTTTATATTACTGCA-ATTTATAGAGCAT  1034

seq1  TTATTTTGGAAACCTAATAGAATTAAGACATAATCATATTATCGCTCAAA  1099
      |   |||||||  ||||||| |||||||  |||||  ||| |   || ||
seq2  T--ATTTGGAA--CTAATAG-ATTAAGAACTAATCTAATTTTACGTC-AA  1078

seq1  AAACATCCCCCCACACCCTGTATTTTGTATATCACAAAGTGCTTCTTAAG  1149
      ||||||| |||||||| ||| ||| |   ||||   |||  |||||||||
seq2  AAACATCTCCCCACACACTGAATTGT---TATC---AAGGACTTCTTAAG  1122

seq1  ATTCTGCTCCTCCAACCTCCAGTTACCCCTTTTGGCA-TGTACACTCTTA  1198
      |||   ||    ||||   ||| || |    |||||| |||  |||||||
seq2  ATTGGTCT----CAAC--TCAGGTATC---GTTGGCAGTGT-GACTCTTA  1162

seq1  GTAGGAAGTGCTTGTGTGGAAC  1220
      ||| ||||  ||||||||| ||
seq2  GTA-GAAGGTCTTGTGTGGGAC  1183