BAC Information

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BAC

Clone NameB6Ng01-015E20
Chromosome8 (Build37)
Map Location 128,424,585 - 128,425,561
singlet/doubletsinglet
Overlap genenone
Upstream geneGm505, Egln1, Tsnax, Disc1, Sipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik
Downstream geneBC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015E20.bB6Ng01-015E20.g
ACCDH849601DH849602
length9891,045
definitionDH849601|Mus musculus domesticus DNA, BAC clone: B6Ng01-015E20, 5' end.DH849602|Mus musculus domesticus DNA, BAC clone: B6Ng01-015E20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttcaaatcaatataccagtcccttagatggcctcattgcaca
ggggctgactccatagcctgagttaccccctctctcacaggaagtgactc
tgttataaatgagctcttgtctactgtgttgggtcacatagtaagtactg
gcaccccttggcaaggacagcttagctcagttcagtgagcacaggatggc
aggagaatcaaacagacttggaaatcaaggagaaaggaaagactgcaagc
ctaaagaaagcagcagaaggttttagtgggtgtaagtgaagcagcgaaca
tgtcagagaggaggagaaccctcggaaataaaaggtaagcacacagggta
aatgtgtgccctggcggtgtggggccataaaacaggtaaatcaatggctc
acctcagcagagagagggtaaccacgactacaccagggcttgggggaggg
taaaataatagaaaaaagacatgaaaagactacaactgtgtaattaaatg
tgagggcacatgatagctttcagaagtgtcttgaagacatgtttgctgaa
attgctaaagtagggcttggggtggagagagaaatggctcagcagctgag
ctcaccttctgttctttcagaggatctgagtttaatttctagtacccata
aggtggcttacagccatctgtaaacgtcaactccaggggatctgatgccc
tcttctgacttctgagggcattgcacgcacacacacatgctaataaagaa
aaataaaataaatattttttttaaaagtgaaatgctaaagtagtttttac
atatatattacattaatatattagaatggaagttatatatgcccaggtgg
ctgtcaggtggggattcttttaatcccagcagtcagaaagcaaaaggcag
gtggattctttcttgggtttcaagaattagccttagtgagcccctagaac
agcccagcagtcacgaagcataagcaggtggaatctttc
gaattcttgtgtttatccccttctctgataacttcttattagctccagga
ctacagatcagtctaaatttgtcaaaatcatgaatcctgacattcaaaga
accccagacctattgtcctaaatattttgcactcagaatcttcctagctt
tccttaagacagggaagcagtctgggacttctgaatgtcatcatggaaac
tgctgagttgtatgtatcagacttagagtggggcaggaggggttcctgac
cctcattctggcagtttcagcatttgaagggctaaggcagtgtaacctcc
cctccccagcctgaaacctgtttgctcaggtttcagtgttagcatcgggg
tggagcctgccgcttaatcgttctgccacgcccactgctggagcctgccg
ccttactgttctggagccatacacgtggtcaccctgcaactggactccag
gattatttggcaggaattagccccttccccctccttcataactcggtgca
cgaattaataaaattgagctttgatcagaacctagtttgtcttagctctg
tctctctcttgtgccgcctagtcccccctcttctcttccaggtttccaag
atgcctttctagactagaacccagacatgtgagccgctggtcggacacaa
cagatctggtgcccaacgtgggggtgagaaatggcagaggacatctggaa
gatggagctccatagaagaagaaaataattaaaggaaacttcatatcgga
gaaggtctgtatggggctaagttgaaacagcattgaacctgagtgctaat
tcacttaggttcagcagtgaagcttatcaggagctaggaacttaacaagc
ggttaactgtagctcccagaagctacatttttaggttgtgagaaaagaaa
gggtttattaaaaggaattaataatcaggcggatggccgcgttaaaactg
cttcatgcggaagaatgtcccaaagtcaagagaaatcagagtgcctgctt
tatctcttgggcttacacaaagttgcttcgccctctgggtctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_128424585_128425561
seq2: B6Ng01-015E20.b_45_1033

seq1  GAATTCTTTTCAAATCAATATACCAGTCCCTTAGATGGCCTCATTGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAAATCAATATACCAGTCCCTTAGATGGCCTCATTGCACA  50

seq1  GGGGCTGACTCCATAGCCTGAGTTACCCCCTCTCTCACAGGAAGTGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGACTCCATAGCCTGAGTTACCCCCTCTCTCACAGGAAGTGACTC  100

seq1  TGTTATAAATGAGCTCTTGTCTACTGTGTTGGGTCACATAGTAAGTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAATGAGCTCTTGTCTACTGTGTTGGGTCACATAGTAAGTACTG  150

seq1  GCACCCCTTGGCAAGGACAGCTTAGCTCAGTTCAGTGAGCACAGGATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCCTTGGCAAGGACAGCTTAGCTCAGTTCAGTGAGCACAGGATGGC  200

seq1  AGGAGAATCAAACAGACTTGGAAATCAAGGAGAAAGGAAAGACTGCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATCAAACAGACTTGGAAATCAAGGAGAAAGGAAAGACTGCAAGC  250

seq1  CTAAAGAAAGCAGCAGAAGGTTTTAGTGGGTGTAAGTGAAGCAGCGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAAGCAGCAGAAGGTTTTAGTGGGTGTAAGTGAAGCAGCGAACA  300

seq1  TGTCAGAGAGGAGGAGAACCCTCGGAAATAAAAGGTAAGCACACAGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGAGGAGGAGAACCCTCGGAAATAAAAGGTAAGCACACAGGGTA  350

seq1  AATGTGTGCCCTGGCGGTGTGGGGCCATAAAACAGGTAAATCAATGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGCCCTGGCGGTGTGGGGCCATAAAACAGGTAAATCAATGGCTC  400

seq1  ACCTCAGCAGAGAGAGGGTAACCACGACTACACCAGGGCTTGGGGGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCAGAGAGAGGGTAACCACGACTACACCAGGGCTTGGGGGAGGG  450

seq1  TAAAATAATAGAAAAAAGACATGAAAAGACTACAACTGTGTAATTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATAGAAAAAAGACATGAAAAGACTACAACTGTGTAATTAAATG  500

seq1  TGAGGGCACATGATAGC-TTCAGAAGTGTCTTGAAGACATGTTTGCTGAA  549
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAGGGCACATGATAGCTTTCAGAAGTGTCTTGAAGACATGTTTGCTGAA  550

seq1  ATTGCTAAAGTAGGGCTTGGGGTGGAGAGAGAAATGGCTCAGCAGCTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAGTAGGGCTTGGGGTGGAGAGAGAAATGGCTCAGCAGCTGAG  600

seq1  CTCACCTTCTGTTCTTTCAGAGGATCTGAGTTTAATTTCTAGTACCCATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTCTGTTCTTTCAGAGGATCTGAGTTTAATTTCTAGTACCCATA  650

seq1  AGGTGGCTTACAGCCATCTGTAAACGTCAACTCCAGGGGATCTGATGCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCTTACAGCCATCTGTAAACGTCAACTCCAGGGGATCTGATGCCC  700

seq1  TCTTCTGACTTCTGAGGGCATTGCACGCACACACACATGCTAATAAAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGACTTCTGAGGGCATTGCACGCACACACACATGCTAATAAAGAA  750

seq1  AAATAAAATAAATA-TTTTTTTAAAAGTGAAATGCTAAAGTAGTTTTTAC  798
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAAATATTTTTTTTAAAAGTGAAATGCTAAAGTAGTTTTTAC  800

seq1  ATATATATTACATTAATATATTAGAAT-GAAGTTATATATG-CCAGGTGG  846
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  ATATATATTACATTAATATATTAGAATGGAAGTTATATATGCCCAGGTGG  850

seq1  CTGTCAGGT-GGGATTCTTTTAATCCCAGCAGTCAGAAGGC-AGAGGCAG  894
      ||||||||| |||||||||||||||||||||||||||| || | ||||||
seq2  CTGTCAGGTGGGGATTCTTTTAATCCCAGCAGTCAGAAAGCAAAAGGCAG  900

seq1  GTGGA-TCTTTCTT-GGTTTCAAG-ACTAGCC-TAGTGAGCCCCAAG-AC  939
      ||||| |||||||| ||||||||| | ||||| ||||||||||| || ||
seq2  GTGGATTCTTTCTTGGGTTTCAAGAATTAGCCTTAGTGAGCCCCTAGAAC  950

seq1  AGCCCAGCAGTCAGAAGGCAGAGGCAGGTGG-ATCTTTC  977
      |||||||||||||  | ||| | |||||||| |||||||
seq2  AGCCCAGCAGTCACGAAGCATAAGCAGGTGGAATCTTTC  989