BAC Information

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BAC

Clone NameB6Ng01-018D13
Chromosome8 (Build37)
Map Location 40,550,596 - 40,691,420
singlet/doubletdoublet
Overlap geneMsr1
Upstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304
Downstream geneEG621431, LOC100039072, LOC666959, EG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D13.bB6Ng01-018D13.g
ACCDH851685DH851686
length908414
definitionDH851685|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D13, 5' end.DH851686|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,690,513 - 40,691,420)(40,550,596 - 40,551,015)
sequence
gaattcaatgtatattttttatactttgggcatgatttaaatatagtaaa
ataaccatgatttcctctttcatatgcatgtcaggatcagtataactccc
tgatcatattggggcaagacccttttaagatcagctgggctgggcagagc
accctactatcatctccttaaaagacctttcacctctggacaagtcatca
acacaagtgacttctgggatccttttgcaactccttcaaatgacattggt
tcctgtgtcatgccatgcctggcttcttgtaacttcttctaaccctgggt
gctgttggggcctccattgacataagtaccttatggcatatgctctgcta
caatgactcccatcccctggcaccttttacctagatgctctacctgttga
gtagagggatgttcctgccttcttcagaccttctgctgttcccctcacct
aactgtgcagaatcctattaaattctaagaaaaacttaattgatattgat
taagtattagttcttgaaatgtaagatattttcctcaaatacaaatagag
attgaaataggggtctgtccatccattcattcactaattcatttaacata
aattcattcattgtgtaccaattggagaaagacttaacaggtataaatat
gtttttttctaactttataagactaattacctctaggagatacaaataca
tcagttataaacaaaccagagaacactgtcccaggaaaagaatagggcta
tacaaatattgaaaggagataattaactttagtagtctaatatattaaaa
atagctctattttttattgcttgtttcactttgctaccttcttattccca
aaattgaagtgtgtgtatgtgtgtgtgtagatatatatatatatatatat
tttacaca
ccaagaagccactgtctttagagctgccagtctatgaccttccatgaaca
ctaaggaatattcaattaaagaaaatacctgatgaaggagagatgagggg
ttgaaaagttcacccaagcatctcctcagtttattaaaaaacaaaacaaa
acataggcttagttttcatataaacacattcacatgaaatcccgagggca
gagaaagcacagtttatttaggtaatgggtttatcaatggaacagcatta
ttttcacaaacaaaactgtaatgcttagattgatgtcaatgctacttagc
tttcctttacagtttgataaaagaataaaaacattatggaggctaaaatc
atttttttttcagagcagtgactcagtcatgttaattattcaagaacagg
attctggtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40690513_40691420
seq2: B6Ng01-018D13.b_45_952 (reverse)

seq1  TGTGTATATATATATATATATATATATATCTACACACACACATACACACA  50
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTA-AAATATATATATATATATATATCTACACACACACATACACACA  49

seq1  CTTCAATTTTGGGAATAAGAAGGTAGCAAAGTGAAACAAGCAAT-AAAAA  99
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTCAATTTTGGGAATAAGAAGGTAGCAAAGTGAAACAAGCAATAAAAAA  99

seq1  TAGAGCTATTTTTAATATATTAGACTACTAAAGTTAATTATCTCCTTTCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTATTTTTAATATATTAGACTACTAAAGTTAATTATCTCCTTTCA  149

seq1  ATATTTGTATAGCCCTATTCTTTTCCTGGGACAGTGTTCTCTGGTTTGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTATAGCCCTATTCTTTTCCTGGGACAGTGTTCTCTGGTTTGTT  199

seq1  TATAACTGATGTATTTGTATCTCCTAGAGGTAATTAGTCTTATAAAGTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGATGTATTTGTATCTCCTAGAGGTAATTAGTCTTATAAAGTTA  249

seq1  GAAAAAAACATATTTATACCTGTTAAGTCTTTCTCCAATTGGTACACAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAACATATTTATACCTGTTAAGTCTTTCTCCAATTGGTACACAAT  299

seq1  GAATGAATTTATGTTAAATGAATTAGTGAATGAATGGATGGACAGACCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATTTATGTTAAATGAATTAGTGAATGAATGGATGGACAGACCCC  349

seq1  TATTTCAATCTCTATTTGTATTTGAGGAAAATATCTTACATTTCAAGAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATCTCTATTTGTATTTGAGGAAAATATCTTACATTTCAAGAAC  399

seq1  TAATACTTAATCAATATCAATTAAGTTTTTCTTAGAATTTAATAGGATTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTAATCAATATCAATTAAGTTTTTCTTAGAATTTAATAGGATTC  449

seq1  TGCACAGTTAGGTGAGGGGAACAGCAGAAGGTCTGAAGAAGGCAGGAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTTAGGTGAGGGGAACAGCAGAAGGTCTGAAGAAGGCAGGAACA  499

seq1  TCCCTCTACTCAACAGGTAGAGCATCTAGGTAAAAGGTGCCAGGGGATGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTACTCAACAGGTAGAGCATCTAGGTAAAAGGTGCCAGGGGATGG  549

seq1  GAGTCATTGTAGCAGAGCATATGCCATAAGGTACTTATGTCAATGGAGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTGTAGCAGAGCATATGCCATAAGGTACTTATGTCAATGGAGGC  599

seq1  CCCAACAGCACCCAGGGTTAGAAGAAGTTACAAGAAGCCAGGCATGGCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGCACCCAGGGTTAGAAGAAGTTACAAGAAGCCAGGCATGGCAT  649

seq1  GACACAGGAACCAATGTCATTTGAAGGAGTTGCAAAAGGATCCCAGAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGAACCAATGTCATTTGAAGGAGTTGCAAAAGGATCCCAGAAGT  699

seq1  CACTTGTGTTGATGACTTGTCCAGAGGTGAAAGGTCTTTTAAGGAGATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTGTTGATGACTTGTCCAGAGGTGAAAGGTCTTTTAAGGAGATGA  749

seq1  TAGTAGGGTGCTCTGCCCAGCCCAGCTGATCTTAAAAGGGTCTTGCCCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGGTGCTCTGCCCAGCCCAGCTGATCTTAAAAGGGTCTTGCCCCA  799

seq1  ATATGATCAGGGAGTTATACTGATCCTGACATGCATATGAAAGAGGAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCAGGGAGTTATACTGATCCTGACATGCATATGAAAGAGGAAAT  849

seq1  CATGGTTATTTTACTATATTTAAATCATGCCCAAAGTATAAAAAATATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTATTTTACTATATTTAAATCATGCCCAAAGTATAAAAAATATAC  899

seq1  ATTGAATTC  908
      |||||||||
seq2  ATTGAATTC  908

seq1: chr8_40550596_40551015
seq2: B6Ng01-018D13.g_68_487

seq1  GAATTCCCAAGAAGCCACTGTCTTTAGAGCTGCCAGTCTATGACCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGAAGCCACTGTCTTTAGAGCTGCCAGTCTATGACCTTCCA  50

seq1  TGAACACTAAGGAATATTCAATTAAAGAAAATACCTGATGAAGGAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTAAGGAATATTCAATTAAAGAAAATACCTGATGAAGGAGAGAT  100

seq1  GAGGGGTTGAAAAGTTCACCCAAGCATCTCCTCAGTTTATTAAAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTTGAAAAGTTCACCCAAGCATCTCCTCAGTTTATTAAAAAACAA  150

seq1  AACAAAACATAGGCTTAGTTTTCATATAAACACATTCACATGAAATCCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACATAGGCTTAGTTTTCATATAAACACATTCACATGAAATCCCG  200

seq1  AGGGCAGAGAAAGCACAGTTTATTTAGGTAATGGGTTTATCAATGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGAGAAAGCACAGTTTATTTAGGTAATGGGTTTATCAATGGAACA  250

seq1  GCATTATTTTCACAAACAAAACTGTAATGCTTAGATTGATGTCAATGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTTTCACAAACAAAACTGTAATGCTTAGATTGATGTCAATGCTA  300

seq1  CTTAGCTTTCCTTTACAGTTTGATAAAAGAATAAAAACATTATGGAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTTTCCTTTACAGTTTGATAAAAGAATAAAAACATTATGGAGGCT  350

seq1  AAAATCATTTTTTTTTCAGAGCAGTGACTCAGTCATGTTAATTATTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTTTTTTTTCAGAGCAGTGACTCAGTCATGTTAATTATTCAAG  400

seq1  AACAGGATTCTGGTGTGTGT  420
      ||||||||||||||||||||
seq2  AACAGGATTCTGGTGTGTGT  420