BAC Information

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BAC

Clone NameB6Ng01-018J22
Chromosome8 (Build37)
Map Location 59,033,991 - 59,165,222
singlet/doubletdoublet
Overlap geneFbxo8, LOC100040431
Upstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983
Downstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018J22.bB6Ng01-018J22.g
ACCDH851967DH851968
length1,1001,217
definitionDH851967|Mus musculus domesticus DNA, BAC clone: B6Ng01-018J22, 5' end.DH851968|Mus musculus domesticus DNA, BAC clone: B6Ng01-018J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,033,991 - 59,035,090)(59,164,002 - 59,165,222)
sequence
gaattcatttgttaattatacggtgttttattttgtttttgacagaaaaa
cacagctctcacttcaaagaggataaaagatagttattctggagctaaac
atgactccatatctgagaacatggcttcaggttattccaactactgtgtt
ccaaccttaacatttttttgacgtttttataaccacagaacaaaagaaag
tctggatcaaggcccttttcaaatacaggatagaaatatgaggaaggtgg
gctgtaataatccaggaaaatctctgccacaggtttcagatgttatctga
tacatgcttagcattttggttggtgaagtttgttgctctattaagttaat
acaccccaaaaagcttcatgtgacagtcataagggtgttaggtcagacac
agtgagcaatggatggctactggggattaaaaatagttcaagataatttg
attctgaatatctacattccagctgtccaaaagcacaaagttccaatcag
tcagtattgaaagagaatctttaacgtgtgtgtggcttttgtgtgtgtgt
gtatttcagttctgttttactttggttttgcaggatctttagtgctttct
acatgtaaggttatatctgctaactgagatggttttactttttgttccct
acttggatgtcttacatttctttattaattgcaggaaacaaacaaacaaa
aaacatgtatagctgaaagagatttggggtatcaagctcagaacccttat
tttaaccaaataccgtgagaaaactgagacttcaaggttttaagagactt
gcctggttctcacaacttgttatggaagaagcctagataaaatcatgtta
tttctgactctctccctagctcagatcaccctcagtgttttgtttaatac
tttaggtgatgtgcgttgagagtaggcaagaatgtgccatcgtcctgggt
gctgatacagccgtgcagggtaaatagtaattctgtcaaaggagaactga
gttttgaaactggtatcttgtgagcaatatgaacaagtaattgtatgtac
agtttaaaaccacatcatttttgggtcaaagccaaactggagaaagttga

gaattcccctttgtcttcctgtttctatttctgcctgatatgtaggaaat
tttgcttttgctatgtaagcagaaaaacatataacgaatgggcaatgacc
atgtggcctatgtggagatcccaaggtcaaagctacaaaaggaaaaattc
agacggcatttcatggccaagcatttacaagctgtctctcaacaatccac
tgaacttctgaaccccgaaagcaaattctctcagcaaaaccgaggcgaga
actgagacttgatctcagattcttctaaactgatgagtgttcggcaggat
atctctcagaataaagtgaggcagcccccataaaggagcagcaataaacc
cctcccacctgccctgtcagtctgccacgcaccataggagaggggcatct
tgtggtgtggcagcaaactgggcagaaagcagccattgctccatggggat
attaggggtgaggatcagggtgccagacatggctaaatgactgaagacag
acattatggcctgcctaaaagcagagaagaaaataagacaaaaatcccac
cgtacctcctctaacaggtagttttactatctagattctagactctagaa
aaatcaaaaagtacatttcatcccttggaattctaggactgtcttttaca
acctcccttctttgcttggaaaacagctgcctgtaaaccaaaacttcctc
cagccctgagggcacataacatgtgtcccctttctcttccatttcttatg
cataacggaaccatcttaaagaataagtgttaggactcaggattgactcg
tgggtttctaaaatctagaagtttcttactggacagctttcgatatcagc
tgttaaatgtgaatgaaagtgtgcatgtaaaaccacatcctgctgcatcc
ttcatgccattgtctttaatattccatttgtgtcctattgccatcagaat
ctgtacaccttgatgcgttaaacagaggaaacgcttttagctcctaaatg
cttactctgggtatatcaaactgtaactagtagaacactttgattcctta
atcagaacccaattatttaatagggctttgaaagaagaagactgtacttt
ttttgagtaaaatgaaaaatattaactaggtctcattcgaggtgttataa
ataacagctgtgaacgatacgcttatttccactctcagaatctgttttat
ttaagtcaaccctctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59033991_59035090
seq2: B6Ng01-018J22.b_45_1144

seq1  GAATTCATTTGTTAATTATACGGTGTTTTATTTTGTTTTTGACAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTTAATTATACGGTGTTTTATTTTGTTTTTGACAGAAAAA  50

seq1  CACAGCTCTCACTTCAAAGAGGATAAAAGATAGTTATTCTGGAGCTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTCACTTCAAAGAGGATAAAAGATAGTTATTCTGGAGCTAAAC  100

seq1  ATGACTCCATATCTGAGAACATGGCTTCAGGTTATTCCAACTACTGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCCATATCTGAGAACATGGCTTCAGGTTATTCCAACTACTGTGTT  150

seq1  CCAACCTTAACATTTTTTTGACGTTTTTATAACCACAGAACAAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTTAACATTTTTTTGACGTTTTTATAACCACAGAACAAAAGAAAG  200

seq1  TCTGGATCAAGGCCCTTTTCAAATACAGGATAGAAATATGAGGAAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCAAGGCCCTTTTCAAATACAGGATAGAAATATGAGGAAGGTGG  250

seq1  GCTGTAATAATCCAGGAAAATCTCTGCCACAGGTTTCAGATGTTATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATAATCCAGGAAAATCTCTGCCACAGGTTTCAGATGTTATCTGA  300

seq1  TACATGCTTAGCATTTTGGTTGGTGAAGTTTGTTGCTCTATTAAGTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCTTAGCATTTTGGTTGGTGAAGTTTGTTGCTCTATTAAGTTAAT  350

seq1  ACACCCCAAAAAGCTTCATGTGACAGTCATAAGGGTGTTAGGTCAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCAAAAAGCTTCATGTGACAGTCATAAGGGTGTTAGGTCAGACAC  400

seq1  AGTGAGCAATGGATGGCTACTGGGGATTAAAAATAGTTCAAGATAATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCAATGGATGGCTACTGGGGATTAAAAATAGTTCAAGATAATTTG  450

seq1  ATTCTGAATATCTACATTCCAGCTGTCCAAAAGCACAAAGTTCCAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAATATCTACATTCCAGCTGTCCAAAAGCACAAAGTTCCAATCAG  500

seq1  TCAGTATTGAAAGAGAATCTTTAACGTGTGTGTGGCTTTTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTGAAAGAGAATCTTTAACGTGTGTGTGGCTTTTGTGTGTGTGT  550

seq1  GTATTTCAGTTCTGTTTTACTTTGGTTTTGCAGGATCTTTAGTGCTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCAGTTCTGTTTTACTTTGGTTTTGCAGGATCTTTAGTGCTTTCT  600

seq1  ACATGTAAGGTTATATCTGCTAACTGAGATGGTTTTACTTTTTGTTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAGGTTATATCTGCTAACTGAGATGGTTTTACTTTTTGTTCCCT  650

seq1  ACTTGGATGTCTTACATTTCTTTATTAATTGCAGGAAACAAACAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATGTCTTACATTTCTTTATTAATTGCAGGAAACAAACAAACAAA  700

seq1  AAACATGTATAGCTGAAAGAGATTTGGGGTATCAAGCTCAGAACCCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTATAGCTGAAAGAGATTTGGGGTATCAAGCTCAGAACCCTTAT  750

seq1  TTTAACCAAATACCGTGAGAAAACTGAGACTTCAAGGTTTTAAGAGACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAAATACCGTGAGAAAACTGAGACTTCAAGGTTTTAAGAGACTT  800

seq1  GCCTGGTTCTCACAACTTGTTATGGAAGAAGCCTAGATAAAATCATGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTTCTCACAACTTGTTATGGAAGAAGCCTAGATAAAATCATGTTA  850

seq1  TTTCTGACTCTCTCCCTAGCTCAGATCACCCTCAGTGTTTTGTTTTAATA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCTGACTCTCTCCCTAGCTCAGATCACCCTCAGTGTTTTG-TTTAATA  899

seq1  CTTTAGGTGATGTGCGTTGAGAGGTAGGCAAGAATGTGCCATCGTCCTGG  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTTAGGTGATGTGCGTTGAGA-GTAGGCAAGAATGTGCCATCGTCCTGG  948

seq1  GTGCTGATACAGCCGTGCAGGGTAAATAGTAATTCTGTCAAAGGAGAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGATACAGCCGTGCAGGGTAAATAGTAATTCTGTCAAAGGAGAACT  998

seq1  GAGTTTTTGAAACTGGTATC-TGTGAGCAATATGACACAGTAAATGTATG  1049
      ||| |||||||||||||||| ||||||||||||||   ||||| ||||||
seq2  GAG-TTTTGAAACTGGTATCTTGTGAGCAATATGAACAAGTAATTGTATG  1047

seq1  TACAAGTTAAAACAACATCATGTTTGGGTCAAAG-CAAACTGAAG-AAGT  1097
      ||||  ||||||| ||||||| |||||||||||| ||||||| || ||||
seq2  TACAGTTTAAAACCACATCATTTTTGGGTCAAAGCCAAACTGGAGAAAGT  1097

seq1  TGA  1100
      |||
seq2  TGA  1100

seq1: chr8_59164002_59165222
seq2: B6Ng01-018J22.g_65_1281 (reverse)

seq1  TTAGAGTTGTTTGACTTAAATAAAACAAGCTTCGGTGAGGTGTGGCACTA  50
      ||||||  | |||||||||||||||| || ||| | ||   |||| | ||
seq2  TTAGAG--GGTTGACTTAAATAAAAC-AGATTCTGAGA---GTGGAAATA  44

seq1  AGCTGTCTGTCTCAAATGCTGGTATTT-TTACA-CTTGAATGA---CTAT  95
      ||| || |   ||| | |||| ||||| | ||| || ||||||   ||| 
seq2  AGC-GTATCGTTCACA-GCTGTTATTTATAACACCTCGAATGAGACCTA-  91

seq1  GTTATTATTTTTTTTATTTTACTTTATAAAAATTAAAGTTCTCTTTCTTT  145
      ||||  || ||||| ||||||| | | ||||| || || |||  ||||||
seq2  GTTA--ATATTTTTCATTTTAC-TCAAAAAAAGTACAG-TCTTCTTCTTT  137

seq1  CAAAGCACTATTAAATAATTGGGTTCTGAATAGGGAATC-AAGTG-TCTA  193
      |||||| |||||||||||||||||||||| || |||||| ||||| ||||
seq2  CAAAGCCCTATTAAATAATTGGGTTCTGATTAAGGAATCAAAGTGTTCTA  187

seq1  CTTAGTTACAGTTTGATATA-CCAGAGTACAGCATTTTAGGAGCTAAAAG  242
      | |||||||||||||||||| |||||||| |||| |||||||||||||||
seq2  C-TAGTTACAGTTTGATATACCCAGAGTA-AGCA-TTTAGGAGCTAAAAG  234

seq1  CGTAT-CTCTGTTTTACGCATC-AGGTGTACAGATTCTGATGGCAATAGG  290
      ||| | |||||||| ||||||| |||||||||||||||||||||||||||
seq2  CGTTTCCTCTGTTTAACGCATCAAGGTGTACAGATTCTGATGGCAATAGG  284

seq1  ACACAAATGGAATATTAAAGACAATGGCATGAAGGATGCAGCAGGATGTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATGGAATATTAAAGACAATGGCATGAAGGATGCAGCAGGATGTG  334

seq1  GTTTTACATGCACACTTTCATTCACATTTAACAGCTGATATCGAAAGCTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACATGCACACTTTCATTCACATTTAACAGCTGATATCGAAAGCTG  384

seq1  TCCAGTAAGAAACTTCTAGATTTTAGAAA-CCACGAGTCAATCCTGAGTC  439
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCAGTAAGAAACTTCTAGATTTTAGAAACCCACGAGTCAATCCTGAGTC  434

seq1  CTAACACTTATTCTTTAAGATGGTTCCGTTATGCATAAG-AATGGAAGAG  488
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTAACACTTATTCTTTAAGATGGTTCCGTTATGCATAAGAAATGGAAGAG  484

seq1  AAAGGGGACACATGTTATGTGCCCTCAGGGCTGGAGGAAGTTTTGGTTTA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGACACATGTTATGTGCCCTCAGGGCTGGAGGAAGTTTTGGTTTA  534

seq1  CAGGCAGCTGTTTTCCAAGCAAAGAAGGGAGGTTGTAAAAGACAGTCCTA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCTGTTTTCCAAGCAAAGAAGGGAGGTTGTAAAAGACAGTCCTA  584

seq1  GAATTCCAAGGGATGAAATGTACTTTTTGATTTTTCTAGAGTCTAGAATC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGGATGAAATGTACTTTTTGATTTTTCTAGAGTCTAGAATC  634

seq1  TAGATAGTAAAACTACCTGTTAGAGGAGGTACGGTGGGATTTTTGTCTTA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTAAAACTACCTGTTAGAGGAGGTACGGTGGGATTTTTGTCTTA  684

seq1  TTTTCTTCTCTGCTTTTAGGCAGGCCATAATGTCTGTCTTCAGTCATTTA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTCTGCTTTTAGGCAGGCCATAATGTCTGTCTTCAGTCATTTA  734

seq1  GCCATGTCTGGCACCCTGATCCTCACCCCTAATATCCCCATGGAGCAATG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTGGCACCCTGATCCTCACCCCTAATATCCCCATGGAGCAATG  784

seq1  GCTGCTTTCTGCCCAGTTTGCTGCCACACCACAAGATGCCCCTCTCCTAT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTCTGCCCAGTTTGCTGCCACACCACAAGATGCCCCTCTCCTAT  834

seq1  GGTGCGTGGCAGACTGACAGGGCAGGTGGGAGGGGTTTATTGCTGCTCCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGTGGCAGACTGACAGGGCAGGTGGGAGGGGTTTATTGCTGCTCCT  884

seq1  TTATGGGGGCTGCCTCACTTTATTCTGAGAGATATCCTGCCGAACACTCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGGGCTGCCTCACTTTATTCTGAGAGATATCCTGCCGAACACTCA  934

seq1  TCAGTTTAGAAGAATCTGAGATCAAGTCTCAGTTCTCGCCTCGGTTTTGC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTAGAAGAATCTGAGATCAAGTCTCAGTTCTCGCCTCGGTTTTGC  984

seq1  TGAGAGAATTTGCTTTCGGGGTTCAGAAGTTCAGTGGATTGTTGAGAGAC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAATTTGCTTTCGGGGTTCAGAAGTTCAGTGGATTGTTGAGAGAC  1034

seq1  AGCTTGTAAATGCTTGGCCATGAAATGCCGTCTGAATTTTTCCTTTTGTA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAAATGCTTGGCCATGAAATGCCGTCTGAATTTTTCCTTTTGTA  1084

seq1  GCTTTGACCTTGGGATCTCCACATAGGCCACATGGTCATTGCCCATTCGT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGACCTTGGGATCTCCACATAGGCCACATGGTCATTGCCCATTCGT  1134

seq1  TATATGTTTTTCTGCTTACATAGCAAAAGCAAAATTTCCTACATATCAGG  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTTCTGCTTACATAGCAAAAGCAAAATTTCCTACATATCAGG  1184

seq1  CAGAAATAGAAACAGGAAGACAAAGGGGAATTC  1221
      |||||||||||||||||||||||||||||||||
seq2  CAGAAATAGAAACAGGAAGACAAAGGGGAATTC  1217