BAC Information

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BAC

Clone NameB6Ng01-021C20
Chromosome8 (Build37)
Map Location 125,057,535 - 125,082,993
singlet/doubletdoublet
Overlap genenone
Upstream gene1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14, Jph3, Klhdc4, Slc7a5, BC048644, Car5a, Banp, Gm22, Zfpm1, Trhr2, 5830416A07Rik, Il17c, Cyba, Mvd, Snai3, Rnf166, 2310061F22Rik
Downstream geneCdt1, Aprt, Galns, Trappc2l, Pabpnl1, Cbfa2t3h, C230057M02Rik, A530010L16Rik, BC021611, LOC100043225, Cdh15, Ankrd11, Spg7, Rpl13, Cpne7, Sult5a1, LOC100043251, Dpep1, Chmp1a, 4732415M23Rik, Cdk10, Spata2L, 1300018I17Rik, Zfp276, Fanca, Spire2, Tcf25, Mc1r, Tubb3, Def8, Afg3l1, Dbndd1, Gas8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021C20.bB6Ng01-021C20.g
ACCDH853758DH853759
length722344
definitionDH853758|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C20, 5' end.DH853759|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,057,535 - 125,058,256)(125,082,650 - 125,082,993)
sequence
gaattctggctccattccctgagctgtgttcctggagcaaggacatcatc
agacttggtagaaaatacccttagccactgaggcatctcactggttcaag
cccatttttaaagatgaagggttcaaagtatagccaagcagtctaacttc
acccagcaacagatatctaatcactcccgtgtcttagtcagggtttctat
tcctgcacaaacatcatgaccaagaagcagttggggaggaaagggtttat
tcagcttacacttccacattgctgttcatcaccaaaggaagtcaggactg
gaactcaagcaggtcaggaagcaggagctgatgcagaagccatggaggga
tgttacttactggcgtgcttcccctggcttgctcagcctgctctcttata
gaaccaagactaccagcccagagatggcacccacccacaaggggcctttc
ccccttgatcactaattgagaaaatgccttacagttggatctcatggagg
catttcctcaactgaagctcctttctctgtgataactccagctgtgtcaa
gttgacacaaaaaaccagccagtacactcctgtctccaggagtagacacc
tagatgctctcctcacttagccaacagaatgctccaaggcacacaccgcc
aacaggcaatgtgtgagcagacagctaacctttgccctgctcaagatgca
catctccctatagctgcaatct
tcagcattcctgcaccaagctgtgcctgagagccttctgagagggcagct
acctacctctcctcttggcttgttctgccttcagacgtgcctccctcctc
atgaggagatgatggagaactgcagtcattcgtatctctctctcagtgac
ccatctaaaaggccagctcagggctgagaaatgggatttcacagaaccag
tctttcattggcagggatgtcttcattggcagcaggagtgaggcatgctg
gttgctggcagaggtcctcggactgttgacggatagccctgtcttcagat
ctccccctgataataagaaacccattacaggggctggagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_125057535_125058256
seq2: B6Ng01-021C20.b_34_755

seq1  GAATTCTGGCTCCATTCCCTGAGCTGTGTTCCTGGAGCAAGGACATCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCTCCATTCCCTGAGCTGTGTTCCTGGAGCAAGGACATCATC  50

seq1  AGACTTGGTAGAAAATACCCTTAGCCACTGAGGCATCTCACTGGTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGTAGAAAATACCCTTAGCCACTGAGGCATCTCACTGGTTCAAG  100

seq1  CCCATTTTTAAAGATGAAGGGTTCAAAGTATAGCCAAGCAGTCTAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTTAAAGATGAAGGGTTCAAAGTATAGCCAAGCAGTCTAACTTC  150

seq1  ACCCAGCAACAGATATCTAATCACTCCCGTGTCTTAGTCAGGGTTTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCAACAGATATCTAATCACTCCCGTGTCTTAGTCAGGGTTTCTAT  200

seq1  TCCTGCACAAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACAAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGGGTTTAT  250

seq1  TCAGCTTACACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTACACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTG  300

seq1  GAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAAGCCATGGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAAGCCATGGAGGGA  350

seq1  TGTTACTTACTGGCGTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTACTGGCGTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATA  400

seq1  GAACCAAGACTACCAGCCCAGAGATGGCACCCACCCACAAGGGGCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAGACTACCAGCCCAGAGATGGCACCCACCCACAAGGGGCCTTTC  450

seq1  CCCCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGG  500

seq1  CATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAA  550

seq1  GTTGACACAAAAAACCAGCCAGTACACTCCTGTCTCCAGGAGTAGACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACACAAAAAACCAGCCAGTACACTCCTGTCTCCAGGAGTAGACACC  600

seq1  TAGATGCTCTCCTCACTTAGCCAACAGAATGCTCCAAGGCACACACCGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCTCTCCTCACTTAGCCAACAGAATGCTCCAAGGCACACACCGCC  650

seq1  AACAGGCAATGTGTGAGCAGACAGCTAACCTTTGCCCTGCTCAAGATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAATGTGTGAGCAGACAGCTAACCTTTGCCCTGCTCAAGATGCA  700

seq1  CAGCTCCCTATAGCTGCAATCT  722
      || |||||||||||||||||||
seq2  CATCTCCCTATAGCTGCAATCT  722

seq1: chr8_125082650_125082993
seq2: B6Ng01-021C20.g_74_417 (reverse)

seq1  CATCTCTCCAGCCCCTGTAATGGGTTTCTTATTATCAGGGGGAGATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCCAGCCCCTGTAATGGGTTTCTTATTATCAGGGGGAGATCTGA  50

seq1  AGACAGGGCTATCCGTCAACAGTCCGAGGACCTCTGCCAGCAACCAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGCTATCCGTCAACAGTCCGAGGACCTCTGCCAGCAACCAGCAT  100

seq1  GCCTCACTCCTGCTGCCAATGAAGACATCCCTGCCAATGAAAGACTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTCCTGCTGCCAATGAAGACATCCCTGCCAATGAAAGACTGGTT  150

seq1  CTGTGAAATCCCATTTCTCAGCCCTGAGCTGGCCTTTTAGATGGGTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATCCCATTTCTCAGCCCTGAGCTGGCCTTTTAGATGGGTCACT  200

seq1  GAGAGAGAGATACGAATGACTGCAGTTCTCCATCATCTCCTCATGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGATACGAATGACTGCAGTTCTCCATCATCTCCTCATGAGGAG  250

seq1  GGAGGCACGTCTGAAGGCAGAACAAGCCAAGAGGAGAGGTAGGTAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACGTCTGAAGGCAGAACAAGCCAAGAGGAGAGGTAGGTAGCTGC  300

seq1  CCTCTCAGAAGGCTCTCAGGCACAGCTTGGTGCAGGAATGCTGA  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGAAGGCTCTCAGGCACAGCTTGGTGCAGGAATGCTGA  344