BAC Information

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BAC

Clone NameB6Ng01-023E03
Chromosome8 (Build37)
Map Location 68,515,997 - 68,601,527
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneTrim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023E03.bB6Ng01-023E03.g
ACCDH855227DH855228
length1,072992
definitionDH855227|Mus musculus domesticus DNA, BAC clone: B6Ng01-023E03, 5' end.DH855228|Mus musculus domesticus DNA, BAC clone: B6Ng01-023E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,600,451 - 68,601,527)(68,515,997 - 68,516,992)
sequence
gaattcagtgcagcatacctactgcacacagagagttataataagttttc
aaccctggggatatttttcagagttaaaattgttatagaacagcaaagag
tgaaaaatgggctgtgaaagcttgggcagtaaagatttacagagggtact
ggcatttctcttcccagtggagcaatcactgtgtcctatttcagatatcc
agactctctggtaaatttatgagagcatccaaaacatccattgctcccct
ttaatccaagctaccaaaacccatgcttcaggaactgccaagtaaatgac
accaacgtagaactacctcaagtgcttggcttcctgctctttggaatcgt
tatcaactcccagccttgtgaaaagtagaattgcactacatcatttcagt
gagcaattctgctacaaaactgtcaggtgcccaggaaagctgctagttgg
agagagacctcactcattagtacttttcatattatctcctatctcttcca
gaaagaataatgaaagaaatgtggaagagcagaagcacaataagaaacat
tgttatacatggcaggtgatactccatacaatatggaaagagattactgt
ggccagggtgaagcatacttttaggtctcacaggggtctctcaatttgct
acagcagctgtactctgtctaaattaccattaaagactgcttattttaaa
atacaattaagtgttaggaaaacaacaaacatcttttctagtggtttgat
aacacaatgacagacagctgatcacatagtgttatcagtggctcacatag
cacctgaagtgtcagtagaagagtgaatatatcaactcgaagagatgaag
tgctatgcattcgctgattgctgtcccttctcttaatgagaaccatctct
gagacaaaatttctgtaatcatgcaatttgcatacatttgttgaagtcat
ctgttgcagctttaatgcctttcccccctaaacaaaagcaataagctagg
aaattctggtactggtccagatacctccatttcaggacacatgtttccta
tcaattcatggtggcctctgtt
gaattcagaggacaacataggaactagttttctccctccaccatttggat
actggagatggaatccatgttatcaggattgttgatagacatattcatct
atggaaccactgacaactagatgttgcattttggagctctttcaaaaatt
tcttctttctttaacttaaaatataaagaaacattccaatttcaagaaag
tcttgctctgtattgatgaaattcaattctattggacatttctctacagg
gaattttctcatctatacatgaggatacttatgataataatcctcccatg
cagagtacattcaagaattcatagtgaggccatgtaaaagtgccaagaat
agagtatttctgtaccttggtgatatattccctaatgaaagatcagtgtc
acacttggagtgcttagaaaaatgtcgccatccagttgtcttcttccagt
ttgggagtccatatggtgttaaggctgcaaactattcatcatcattctaa
gtactatcacaaagctgcctaacagtcctgagacctataaagtttccaaa
ttactcaaaattattgtttgtatgttttatgtttgtgtgtggtatgtgat
tatgtgaatatggatacatttgcatgtaggttcctgtaaatgtattttgt
acatgcatgtaaaggccagagatcaaatatgggagtgtttctctgtctaa
agttatctagtttctatagacattgctagaaaacttatggggagtcacca
gtctctatttttctggctttgagattataagtatatgtcattgtacatga
catttatctgtttgtttgtttgttgttgttttaattattcactttacacc
caattcaatcactctttcctggtcattccccttacaccttccccacccct
tcactctgagcaggtgaaggctctctggttttacagaaaagcatccatca
aagaatatatctcataacaggcacactttcggaatccctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68600451_68601527
seq2: B6Ng01-023E03.b_50_1121 (reverse)

seq1  AACAGAGTCAACCATGATATTGATAGGAAACATGTGTCCTGAAATTGGAG  50
      ||||||| | ||||||| |||||||||||||||||||||||||| |||||
seq2  AACAGAGGCCACCATGA-ATTGATAGGAAACATGTGTCCTGAAA-TGGAG  48

seq1  GTATTCTGGGACCAGTACCAGAATTTCCTAGCTTATTGCTTTTGTTTAGG  100
      ||| ||| |||||||||||||||||||||||||||||||||||||||| |
seq2  GTA-TCT-GGACCAGTACCAGAATTTCCTAGCTTATTGCTTTTGTTTA-G  95

seq1  GGGGGAAAGGCATTAAAGCTGCAACAGATGACTTCAACAAATGTATGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAAGGCATTAAAGCTGCAACAGATGACTTCAACAAATGTATGCAA  145

seq1  ATTGCATGATTACAGAAATTTTGTCTCAGAGATGGTTCTCATTAAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGATTACAGAAATTTTGTCTCAGAGATGGTTCTCATTAAGAGAA  195

seq1  GGGACAGCAATCAGCGAATGCATAGCACTTCATCTCTTCGAGTTGATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGCAATCAGCGAATGCATAGCACTTCATCTCTTCGAGTTGATATA  245

seq1  TTCACTCTTCTACTGACACTTCAGGTGCTATGTGAGCCACTGATAACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTTCTACTGACACTTCAGGTGCTATGTGAGCCACTGATAACACT  295

seq1  ATGTGATCAGCTGTCTGTCATTGTGTTATCAAACCACTAGAAAAGATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATCAGCTGTCTGTCATTGTGTTATCAAACCACTAGAAAAGATGTT  345

seq1  TGTTGTTTTCCTAACACTTAATTGTATTTTAAAATAAGCAGTCTTTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTTCCTAACACTTAATTGTATTTTAAAATAAGCAGTCTTTAATG  395

seq1  GTAATTTAGACAGAGTACAGCTGCTGTAGCAAATTGAGAGACCCCTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAGACAGAGTACAGCTGCTGTAGCAAATTGAGAGACCCCTGTGA  445

seq1  GACCTAAAAGTATGCTTCACCCTGGCCACAGTAATCTCTTTCCATATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAAAGTATGCTTCACCCTGGCCACAGTAATCTCTTTCCATATTGT  495

seq1  ATGGAGTATCACCTGCCATGTATAACAATGTTTCTTATTGTGCTTCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTATCACCTGCCATGTATAACAATGTTTCTTATTGTGCTTCTGCT  545

seq1  CTTCCACATTTCTTTCATTATTCTTTCTGGAAGAGATAGGAGATAATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACATTTCTTTCATTATTCTTTCTGGAAGAGATAGGAGATAATATG  595

seq1  AAAAGTACTAATGAGTGAGGTCTCTCTCCAACTAGCAGCTTTCCTGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTACTAATGAGTGAGGTCTCTCTCCAACTAGCAGCTTTCCTGGGCA  645

seq1  CCTGACAGTTTTGTAGCAGAATTGCTCACTGAAATGATGTAGTGCAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAGTTTTGTAGCAGAATTGCTCACTGAAATGATGTAGTGCAATTC  695

seq1  TACTTTTCACAAGGCTGGGAGTTGATAACGATTCCAAAGAGCAGGAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCACAAGGCTGGGAGTTGATAACGATTCCAAAGAGCAGGAAGCC  745

seq1  AAGCACTTGAGGTAGTTCTACGTTGGTGTCATTTACTTGGCAGTTCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTGAGGTAGTTCTACGTTGGTGTCATTTACTTGGCAGTTCCTGA  795

seq1  AGCATGGGTTTTGGTAGCTTGGATTAAAGGGGAGCAATGGATGTTTTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGTTTTGGTAGCTTGGATTAAAGGGGAGCAATGGATGTTTTGGA  845

seq1  TGCTCTCATAAATTTACCAGAGAGTCTGGATATCTGAAATAGGACACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCATAAATTTACCAGAGAGTCTGGATATCTGAAATAGGACACAGT  895

seq1  GATTGCTCCACTGGGAAGAGAAATGCCAGTACCCTCTGTAAATCTTTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTCCACTGGGAAGAGAAATGCCAGTACCCTCTGTAAATCTTTACT  945

seq1  GCCCAAGCTTTCACAGCCCATTTTTCACTCTTTGCTGTTCTATAACAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGCTTTCACAGCCCATTTTTCACTCTTTGCTGTTCTATAACAATT  995

seq1  TTAACTCTGAAAAATATCCCCAGGGTTGAAAACTTATTATAACTCTCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCTGAAAAATATCCCCAGGGTTGAAAACTTATTATAACTCTCTGT  1045

seq1  GTGCAGTAGGTATGCTGCACTGAATTC  1077
      |||||||||||||||||||||||||||
seq2  GTGCAGTAGGTATGCTGCACTGAATTC  1072

seq1: chr8_68515997_68516992
seq2: B6Ng01-023E03.g_66_1047

seq1  GAATTCAGAGGACAACATAGGAACTAGTTTTCTCCCTCCACCATTTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGACAACATAGGAACTAGTTTTCTCCCTCCACCATTTGGAT  50

seq1  ACTGGAGATGGAATCCATGTTATCAGGATTGTTGATAGACATATTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGATGGAATCCATGTTATCAGGATTGTTGATAGACATATTCATCT  100

seq1  ATGGAACCACTGACAACTAGATGTTGCATTTTGGAGCTCTTTCAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACCACTGACAACTAGATGTTGCATTTTGGAGCTCTTTCAAAAATT  150

seq1  TCTTCTTTCTTTAACTTAAAATATAAAGAAACATTCCAATTTCAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCTTTAACTTAAAATATAAAGAAACATTCCAATTTCAAGAAAG  200

seq1  TCTTGCTCTGTATTGATGAAATTCAATTCTATTGGACATTTCTCTACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTGTATTGATGAAATTCAATTCTATTGGACATTTCTCTACAGG  250

seq1  GAATTTTCTCATCTATACATGAGGATACTTATGATAATAATCCTCCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTCATCTATACATGAGGATACTTATGATAATAATCCTCCCATG  300

seq1  CAGAGTACATTCAAGAATTCATAGTGAGGCCATGTAAAAGTGCCAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACATTCAAGAATTCATAGTGAGGCCATGTAAAAGTGCCAAGAAT  350

seq1  AGAGTATTTCTGTACCTTGGTGATATATTCCCTAATGAAAGATCAGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTTCTGTACCTTGGTGATATATTCCCTAATGAAAGATCAGTGTC  400

seq1  ACACTTGGAGTGCTTAGAAAAATGTCGCCATCCAGTTGTCTTCTTCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGGAGTGCTTAGAAAAATGTCGCCATCCAGTTGTCTTCTTCCAGT  450

seq1  TTGGGAGTCCATATGGTGTTAAGGCTGCAAACTATTCATCATCATTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTCCATATGGTGTTAAGGCTGCAAACTATTCATCATCATTCTAA  500

seq1  GTACTATCACAAAGCTGCCTAACAGTCCTGAGACCTATAAAGTTTCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATCACAAAGCTGCCTAACAGTCCTGAGACCTATAAAGTTTCCAAA  550

seq1  TTACTCAAAATTATTGTTTGTATGTTTTATGTTTGTGTGTGGTATGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAAATTATTGTTTGTATGTTTTATGTTTGTGTGTGGTATGTGAT  600

seq1  TATGTGAATATGGATACATTTGCATGTAGGTTCCTGTAAATGTA-TTTGT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATGTGAATATGGATACATTTGCATGTAGGTTCCTGTAAATGTATTTTGT  650

seq1  ACATGCATGTAAAGGCCAGAGATCAAATATGGGAGTGTTTCTCTGTCTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGTAAAGGCCAGAGATCAAATATGGGAGTGTTTCTCTGTCTAA  700

seq1  AGTTATCTAGTTTCTATAGACATTGCTAGAAAACTTAT-GGGAGTCACCA  748
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGTTATCTAGTTTCTATAGACATTGCTAGAAAACTTATGGGGAGTCACCA  750

seq1  GTCTCTATTTTTCTGGCTTTGAGATTATAAGTATATGTCATTGTACATGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATTTTTCTGGCTTTGAGATTATAAGTATATGTCATTGTACATGA  800

seq1  CATTTATTTGTTTGTTTGTTTGTTTGTTTGTTTTAATTATTCACTTTACA  848
      ||||||| ||||||||||||||||   |||||||||||||||||||||||
seq2  CATTTATCTGTTTGTTTGTTTGTT--GTTGTTTTAATTATTCACTTTACA  848

seq1  CCCAATTCATTCACTCTTTCCTGGTCATTCCCC-TACAACCCTTCCCCTA  897
      ||||||||| ||||||||||||||||||||||| ||||  ||||||||  
seq2  CCCAATTCAATCACTCTTTCCTGGTCATTCCCCTTACA--CCTTCCCC--  894

seq1  CCCCCTTCTCTTCTGAGCAGGTGAGGGCTCTCCTGGTTATTACCAGAAAA  947
       ||||||| | ||||||||||||| |||||| |||||| ||| |||||||
seq2  ACCCCTTCAC-TCTGAGCAGGTGAAGGCTCT-CTGGTT-TTA-CAGAAAA  940

seq1  GGCAGCCCATCTAGAAGAATATATCTCACATACAGGCAACAGCTTTCGG  996
       |||  |||||   |||||||||||||| | |||||| ||| |||||||
seq2  -GCA-TCCATC--AAAGAATATATCTCATA-ACAGGC-ACA-CTTTCGG  982